Pavir.Ca02738 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ca02738 T072348_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.809 0.667
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.800 0.635
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca02738.1.p bZIP 179 241

Links

Other bZIP family TFs
Other Panicum virgatum TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000468 Ricinus communis 29598.m000468 I 0.818
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.808
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.817
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.800
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.800
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.812
Bo7g093030 Brassica oleracea Bo7g093030 I 0.797
Bra010010 Brassica rapa Bra010010 I 0.811
Bra020620 Brassica rapa Bra020620 I 0.807
cassava18334.valid.m1 Manihot esculenta cassava18334.valid.m1 I 0.791
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.821
Ca_03753 Cicer arietinum Ca_03753 I 0.809
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.813
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.805
Cla011478 Citrullus lanatus Cla011478 I 0.794
Cla015037 Citrullus lanatus Cla015037 I 0.798
Cla020112 Citrullus lanatus Cla020112 I 0.811
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.811
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.794
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.798
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I 0.796
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.788
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.808
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.821
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.821
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.821
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.809
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.794
GRMZM2G073427 Zea mays GRMZM2G073427 I 0.849
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.800
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.809
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.821
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.794
gw1.213.115.1 Physcomitrella patens gw1.213.115.1 I 0.782
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I 0.782
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.799
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.845
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.823
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.815
Lus10026973.g Linum usitatissimum Lus10026973.g I 0.782
MDP0000270365 Malus domestica MDP0000270365 I 0.807
mgf007535m Mimulus guttatus mgf007535m I 0.800
mgf009803m Mimulus guttatus mgf009803m I 0.818
mgf012838m Mimulus guttatus mgf012838m I 0.820
mgf013074m Mimulus guttatus mgf013074m I 0.800
OB12G24740 Oryza brachyantha OB12G24740 I 0.802
OBART02G05680 Oryza barthii OBART02G05680 I 0.800
OBART02G11580 Oryza barthii OBART02G11580 I 0.800
OBART12G18120 Oryza barthii OBART12G18120 I 0.812
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.800
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.800
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.812
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.800
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.800
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.800
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.800
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.812
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.800
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.843
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.821
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.805
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.800
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.800
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.800
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.800
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.812
OS02G0175100 Oryza sativa OS02G0175100 I 0.800
OS02G0266800 Oryza sativa OS02G0266800 D 0.800
OS12G0601800 Oryza sativa OS12G0601800 I 0.812
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.800
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.800
Pavir.Cb00258 Panicum virgatum Pavir.Cb00258 I 0.868
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.800
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I 0.794
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.821
PK05128.1 Cannabis sativa PK05128.1 D 0.809
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.821
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.821
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.822
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.800
Sb08g020600 Sorghum bicolor Sb08g020600 I 0.869
Si017778m.g Setaria italica Si017778m.g I 0.800
Si022331m.g Setaria italica Si022331m.g I 0.865
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.821
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I 0.794
TCM_026349 Theobroma cacao TCM_026349 I 0.822
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.803
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I 0.796
VIT_07s0141g00170 Vitis vinifera VIT_07s0141g00170 I 0.795
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.821