Pavir.Cb00258 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Cb00258 T072350_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.789 0.651
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb00258.1.p bZIP 123 185

Links

Other bZIP family TFs
Other Panicum virgatum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I 0.868
Sb08g020600 Sorghum bicolor Sb08g020600 I 0.849
Si022331m.g Setaria italica Si022331m.g I 0.845
GRMZM2G073427 Zea mays GRMZM2G073427 I 0.829
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.824
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.823
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.803
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.802
TCM_026349 Theobroma cacao TCM_026349 I 0.802
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.801
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.801
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.801
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.801
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.801
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.801
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.801
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.801
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.801
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.801
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.801
mgf012838m Mimulus guttatus mgf012838m I 0.800
mgf009803m Mimulus guttatus mgf009803m I 0.798
29598.m000468 Ricinus communis 29598.m000468 I 0.798
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.797
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.795
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.793
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.792
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.792
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.792
OS12G0601800 Oryza sativa OS12G0601800 I 0.792
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.792
OBART12G18120 Oryza barthii OBART12G18120 I 0.792
BRADI4G02570 Brachypodium distachyon BRADI4G02570 N 0.791
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.791
Cla020112 Citrullus lanatus Cla020112 I 0.791
Bra010010 Brassica rapa Bra010010 I 0.791
PK05128.1 Cannabis sativa PK05128.1 D 0.789
Ca_03753 Cicer arietinum Ca_03753 I 0.789
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.789
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.789
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.788
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.787
Bra020620 Brassica rapa Bra020620 I 0.787
MDP0000270365 Malus domestica MDP0000270365 I 0.787
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.785
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.785
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.783