Pavir.J07252 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J07252 T072455_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.783 0.962
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.783 0.943
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.783 0.906
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.783 0.906
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J07252.1.p bZIP 81 133

Links

Other bZIP family TFs
Other Panicum virgatum TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29804.m001495 Ricinus communis 29804.m001495 I 0.783
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I 0.783
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I 0.783
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I 0.783
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I 0.783
AtbZIP52 Arabidopsis thaliana AT1G06850 D 0.787
BGIOSGA012577 Oryza indica BGIOSGA012577 I 0.783
BGIOSGA023710 Oryza indica BGIOSGA023710 I 0.783
Bo8g007220 Brassica oleracea Bo8g007220 I 0.783
Bo8g114410 Brassica oleracea Bo8g114410 I 0.783
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I 0.783
Bra030663 Brassica rapa Bra030663 I 0.783
Bra031541 Brassica rapa Bra031541 I 0.783
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I 0.783
Carubv10009673m.g Capsella rubella Carubv10009673m.g I 0.783
Ca_08929 Cicer arietinum Ca_08929 I 0.783
Ca_15657 Cicer arietinum Ca_15657 I 0.783
Ciclev10032076m.g Citrus clementina Ciclev10032076m.g I 0.783
Cla007409 Citrullus lanatus Cla007409 I 0.783
Cla013626 Citrullus lanatus Cla013626 I 0.783
Cucsa.118900 Cucumis sativus Cucsa.118900 I 0.783
Cucsa.143950 Cucumis sativus Cucsa.143950 I 0.783
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I 0.783
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I 0.783
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I 0.783
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I 0.783
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I 0.783
GLYMA02G40270 Glycine max GLYMA02G40270 I 0.783
GLYMA11G30940 Glycine max GLYMA11G30940 I 0.783
GLYMA14G38460 Glycine max GLYMA14G38460 I 0.783
GLYMA18G05880 Glycine max GLYMA18G05880 I 0.783
GRMZM2G151295 Zea mays GRMZM2G151295 I 0.783
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I 0.783
LPERR03G14390 Leersia perrieri LPERR03G14390 I 0.783
LPERR07G23230 Leersia perrieri LPERR07G23230 I 0.783
Lus10008605.g Linum usitatissimum Lus10008605.g I 0.783
Lus10009907.g Linum usitatissimum Lus10009907.g I 0.783
Lus10042211.g Linum usitatissimum Lus10042211.g I 0.783
MDP0000129203 Malus domestica MDP0000129203 I 0.783
MDP0000210251 Malus domestica MDP0000210251 I 0.783
MDP0000247372 Malus domestica MDP0000247372 I 0.787
MLOC_44311 Hordeum vulgare MLOC_44311 I 0.783
MTR_3g467120 Medicago truncatula MTR_3g467120 I 0.783
MTR_5g075390 Medicago truncatula MTR_5g075390 I 0.783
OB03G26210 Oryza brachyantha OB03G26210 I 0.783
OB07G31840 Oryza brachyantha OB07G31840 I 0.783
OBART03G16510 Oryza barthii OBART03G16510 I 0.783
OBART07G26390 Oryza barthii OBART07G26390 I 0.783
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I 0.783
OLONG_008214 Oryza longistaminata OLONG_008214 I 0.783
OLONG_019327 Oryza longistaminata OLONG_019327 I 0.783
OMERI03G14760 Oryza meridionalis OMERI03G14760 I 0.783
OMERI07G23010 Oryza meridionalis OMERI07G23010 I 0.783
ONIVA03G17500 Oryza nivara ONIVA03G17500 I 0.783
ONIVA07G26100 Oryza nivara ONIVA07G26100 I 0.783
OPUNC03G15960 Oryza punctata OPUNC03G15960 I 0.783
OPUNC07G24840 Oryza punctata OPUNC07G24840 I 0.783
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I 0.783
ORGLA03G0157900 Oryza glaberrima ORGLA03G0157900 I 0.784
ORGLA07G0207300 Oryza glaberrima ORGLA07G0207300 I 0.783
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I 0.783
RF2B Oryza sativa OS03G0336200 I 0.783
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I 0.783
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I 0.783
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I 0.783
PK00315.1 Cannabis sativa PK00315.1 D 0.783
PK16335.1 Cannabis sativa PK16335.1 D 0.783
Pm000251 Prunus mume Pm000251 I 0.783
Pm019060 Prunus mume Pm019060 I 0.783
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I 0.783
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I 0.783
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I 0.783
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I 0.783
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I 0.783
Si036380m.g Setaria italica Si036380m.g I 0.783
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I 0.783
TCM_042286 Theobroma cacao TCM_042286 I 0.783
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I 0.783
Traes_2AS_3B7BE6FDC Triticum aestivum Traes_2AS_3B7BE6FDC I 0.783
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I 0.783
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I 0.783
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I 0.783