CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000247372
(
Malus domestica
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
MDP0000247372
T072167_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.784
0.912
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.784
0.912
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.784
0.877
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.784
0.877
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000247372
bZIP
155
211
DPKRAKRILANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQVLTEML
Links
Other
bZIP
family TFs
Other
Malus domestica
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AtbZIP52
Arabidopsis thaliana
AT1G06850
D
0.787
Pavir.J07252
Panicum virgatum
Pavir.J07252
I
0.787
AtbZIP52
Arabidopsis lyrata
Al_scaffold_0001_623
I
0.784
AMTR_s00077p00070990
Amborella trichopoda
AMTR_s00077p00070990
I
0.784
BGIOSGA012577
Oryza indica
BGIOSGA012577
I
0.784
BGIOSGA023710
Oryza indica
BGIOSGA023710
I
0.784
Bo8g007220
Brassica oleracea
Bo8g007220
I
0.784
Bo8g114410
Brassica oleracea
Bo8g114410
I
0.784
Bra030663
Brassica rapa
Bra030663
I
0.784
Bra031541
Brassica rapa
Bra031541
I
0.784
GLYMA02G40270
Glycine max
GLYMA02G40270
I
0.784
GLYMA11G30940
Glycine max
GLYMA11G30940
I
0.784
GLYMA14G38460
Glycine max
GLYMA14G38460
I
0.784
GLYMA18G05880
Glycine max
GLYMA18G05880
I
0.784
GRMZM2G151295
Zea mays
GRMZM2G151295
I
0.784
GSMUA_Achr2G18830_001
Musa acuminata
GSMUA_Achr2G18830_001
I
0.784
LPERR03G14390
Leersia perrieri
LPERR03G14390
I
0.784
LPERR07G23230
Leersia perrieri
LPERR07G23230
I
0.784
MLOC_44311
Hordeum vulgare
MLOC_44311
I
0.784
MTR_3g467120
Medicago truncatula
MTR_3g467120
I
0.784
MTR_5g075390
Medicago truncatula
MTR_5g075390
I
0.784
OB03G26210
Oryza brachyantha
OB03G26210
I
0.784
OB07G31840
Oryza brachyantha
OB07G31840
I
0.784
OBART03G16510
Oryza barthii
OBART03G16510
I
0.784
OBART07G26390
Oryza barthii
OBART07G26390
I
0.784
OGLUM07G26420
Oryza glumaepatula
OGLUM07G26420
I
0.784
OLONG_008214
Oryza longistaminata
OLONG_008214
I
0.784
OLONG_019327
Oryza longistaminata
OLONG_019327
I
0.784
OMERI03G14760
Oryza meridionalis
OMERI03G14760
I
0.784
OMERI07G23010
Oryza meridionalis
OMERI07G23010
I
0.784
ONIVA03G17500
Oryza nivara
ONIVA03G17500
I
0.784
ONIVA07G26100
Oryza nivara
ONIVA07G26100
I
0.784
OPUNC03G15960
Oryza punctata
OPUNC03G15960
I
0.784
OPUNC07G24840
Oryza punctata
OPUNC07G24840
I
0.784
ORGLA03G0157900
Oryza glaberrima
ORGLA03G0157900
I
0.784
ORGLA07G0207300
Oryza glaberrima
ORGLA07G0207300
I
0.784
ORUFI03G17050
Oryza rufipogon
ORUFI03G17050
I
0.784
RF2B
Oryza sativa
OS03G0336200
I
0.784
PGSC0003DMG400016651
Solanum tuberosum
PGSC0003DMG400016651
I
0.784
PGSC0003DMG400027599
Solanum tuberosum
PGSC0003DMG400027599
I
0.784
POPTR_0019s15040
Populus trichocarpa
POPTR_0019s15040
I
0.784
PRUPE_ppa006097mg
Prunus persica
PRUPE_ppa006097mg
I
0.784
PRUPE_ppa007645mg
Prunus persica
PRUPE_ppa007645mg
I
0.784
Si036380m.g
Setaria italica
Si036380m.g
I
0.784
Solyc06g048630.2
Solanum lycopersicum
Solyc06g048630.2
I
0.784
TCM_042286
Theobroma cacao
TCM_042286
I
0.784
Traes_2AS_3B7BE6FDC
Triticum aestivum
Traes_2AS_3B7BE6FDC
I
0.784
Traes_2DS_93EAEC654
Triticum aestivum
Traes_2DS_93EAEC654
I
0.784
AtbZIP52
Vitis vinifera
VIT_06s0004g08070
I
0.784
VIT_13s0067g02900
Vitis vinifera
VIT_13s0067g02900
I
0.784
Ca_08929
Cicer arietinum
Ca_08929
I
0.784
Ca_15657
Cicer arietinum
Ca_15657
I
0.784
Cla007409
Citrullus lanatus
Cla007409
I
0.784
Cla013626
Citrullus lanatus
Cla013626
I
0.784
Pm000251
Prunus mume
Pm000251
I
0.784
Pm019060
Prunus mume
Pm019060
I
0.784
29804.m001495
Ricinus communis
29804.m001495
I
0.784
Cucsa.118900
Cucumis sativus
Cucsa.118900
I
0.784
Cucsa.143950
Cucumis sativus
Cucsa.143950
I
0.784
Aquca_004_00525
Aquilegia coerulea
Aquca_004_00525
I
0.784
Aquca_045_00222
Aquilegia coerulea
Aquca_045_00222
I
0.784
Bostr.25219s0275
Boechera stricta
Bostr.25219s0275
I
0.784
Cagra.1671s0308
Capsella grandiflora
Cagra.1671s0308
I
0.784
Carubv10009673m.g
Capsella rubella
Carubv10009673m.g
I
0.784
Ciclev10032076m.g
Citrus clementina
Ciclev10032076m.g
I
0.784
Eucgr.G03135
Eucalyptus grandis
Eucgr.G03135
I
0.784
Eucgr.J00119
Eucalyptus grandis
Eucgr.J00119
I
0.784
evm.TU.supercontig_2.298
Carica papaya
evm.TU.supercontig_2.298
I
0.784
gene21344-v1.0-hybrid
Fragaria vesca
gene21344-v1.0-hybrid
I
0.784
gene28103-v1.0-hybrid
Fragaria vesca
gene28103-v1.0-hybrid
I
0.784
Lus10008605.g
Linum usitatissimum
Lus10008605.g
I
0.784
Lus10009907.g
Linum usitatissimum
Lus10009907.g
I
0.784
Lus10042211.g
Linum usitatissimum
Lus10042211.g
I
0.784
MDP0000129203
Malus domestica
MDP0000129203
I
0.784
MDP0000210251
Malus domestica
MDP0000210251
I
0.784
orange1.1g020026m.g
Citrus sinensis
orange1.1g020026m.g
I
0.784
Pavir.Ib01574
Panicum virgatum
Pavir.Ib01574
I
0.784
SapurV1A.0215s0230
Salix purpurea
SapurV1A.0215s0230
I
0.784
SapurV1A.3480s0020
Salix purpurea
SapurV1A.3480s0020
I
0.784
Thhalv10008146m.g
Eutrema salsugineum
Thhalv10008146m.g
I
0.784
PK00315.1
Cannabis sativa
PK00315.1
D
0.784
PK16335.1
Cannabis sativa
PK16335.1
D
0.784
POPTR_0013s15280
Populus trichocarpa
POPTR_0013s15280
I
0.782