CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10004635m.g
(
Eutrema salsugineum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Thhalv10004635m.g
T072634_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP60
M00855_2.00
Arabidopsis thaliana
TGACGTSR
YSACGTCA
PBM
Franco-Zorrilla et al.(2014)
bZIP60
0.848
0.875
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004635m
bZIP
155
218
DAMAKKRRRRVRNRDAAVRSRERKKEYVTDLEKKSKYLERECMRLGRMLECFVAENHSLRLCLQ
Links
Other
bZIP
family TFs
Other
Eutrema salsugineum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZIP60
Arabidopsis thaliana
AT1G42990
D
0.848
Bo8g024280
Brassica oleracea
Bo8g024280
I
0.898
Bostr.12302s0013
Boechera stricta
Bostr.12302s0013
I
0.848
Cagra.2795s0001
Capsella grandiflora
Cagra.2795s0001
I
0.882
Carubv10009864m.g
Capsella rubella
Carubv10009864m.g
I
0.882
Ca_20172
Cicer arietinum
Ca_20172
N
0.794
ATBZIP60
Arabidopsis lyrata
fgenesh2_kg.1__3703__AT1G42990.1
I
0.858