CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BZIP60
(
Arabidopsis thaliana
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
AT1G42990
T056865_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP60
M00855_2.00
Arabidopsis thaliana
TGACGTSR
YSACGTCA
PBM
Franco-Zorrilla et al.(2014)
bZIP60
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.782
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00855_2.00
bZIP
138
198
DAVAKKRRRRVRNRDAAVRSRERKKEYVQDLEKKSKYLERECLRLGRMLECFVAENQSLRY
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G42990.1
bZIP
138
198
DAVAKKRRRRVRNRDAAVRSRERKKEYVQDLEKKSKYLERECLRLGRMLECFVAENQSLRY
Links
Other
bZIP
family TFs
Other
Arabidopsis thaliana
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATBZIP60
Arabidopsis lyrata
fgenesh2_kg.1__3703__AT1G42990.1
I
0.854
Bostr.12302s0013
Boechera stricta
Bostr.12302s0013
I
0.854
Thhalv10004635m.g
Eutrema salsugineum
Thhalv10004635m.g
I
0.848
Bo8g024280
Brassica oleracea
Bo8g024280
I
0.847
Cagra.2795s0001
Capsella grandiflora
Cagra.2795s0001
I
0.840
Carubv10009864m.g
Capsella rubella
Carubv10009864m.g
I
0.840