CpipJ_CPIJ012530 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ012530 T077770_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.796 0.928
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.796 0.928
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.796 0.928
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.788 0.891
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.788 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ012530-RA C2H2 ZF 235 257
CpipJ_CPIJ012530-RA C2H2 ZF 263 285
CpipJ_CPIJ012530-RA C2H2 ZF 291 313
CpipJ_CPIJ012530-RA C2H2 ZF 319 341
CpipJ_CPIJ012530-RA C2H2 ZF 347 369
CpipJ_CPIJ012530-RA C2H2 ZF 375 398

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP25 Arabidopsis thaliana AT3G54620 I 0.000
Bo3g032910 Brassica oleracea Bo3g032910 N 0.000
Bo4g119810 Brassica oleracea Bo4g119810 I 0.000
Bo8g084770 Brassica oleracea Bo8g084770 I 0.000
Bostr.0697s0074 Boechera stricta Bostr.0697s0074 I 0.000
Bra000102 Brassica rapa Bra000102 I 0.000
Bra007083 Brassica rapa Bra007083 I 0.000
Bra014802 Brassica rapa Bra014802 I 0.000
Bra024310 Brassica rapa Bra024310 I 0.000
Cagra.0562s0051 Capsella grandiflora Cagra.0562s0051 I 0.000
Carubv10017372m.g Capsella rubella Carubv10017372m.g I 0.000
Ca_03753 Cicer arietinum Ca_03753 I 0.000
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.000
Cla015037 Citrullus lanatus Cla015037 I 0.000
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.000
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.000
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.000
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.000
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.000
MDP0000176747 Malus domestica MDP0000176747 I 0.000
PK05128.1 Cannabis sativa PK05128.1 D 0.000
PK11472.1 Cannabis sativa PK11472.1 I 0.000
Pm020231 Prunus mume Pm020231 I 0.000
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.000
ATBZIP25 Arabidopsis lyrata scaffold_502576.1 N 0.000