VDBG_03095 (Verticillium albo atrum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 VDBG_03095 T078385_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU06907
M01889_2.00 		Neurospora crassa
YYMGCCHCNN
NNGDGGCKRR		 PBM
Weirauch et al.(2014)
pTH9682 		0.781 0.866
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_03095T0 C2H2 ZF 387 411
VDBG_03095T0 C2H2 ZF 417 439
VDBG_03095T0 C2H2 ZF 445 465

Links

Other C2H2 ZF family TFs
Other Verticillium albo atrum TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007733 Calypte anna Aan_R007733 I 0.000
Afo_R009498 Aptenodytes forsteri Afo_R009498 I 0.000
Alligator_sinensis_CCG006997.1 Alligator sinensis Alligator_sinensis_CCG006997.1 I 0.000
Cmyd_10012130 Chelonia mydas Cmyd_10012130 I 0.000
ENSACAG00000010131 Anolis carolinensis ENSACAG00000010131 I 0.000
ENSAMEG00000018009 Ailuropoda melanoleuca ENSAMEG00000018009 I 0.000
ENSAPLG00000015153 Anas platyrhynchos ENSAPLG00000015153 I 0.000
TET1 Bos taurus ENSBTAG00000037756 I 0.000
TET1 Canis familiaris ENSCAFG00000013739 I 0.000
TET1 Callithrix jacchus ENSCJAG00000019005 I 0.000
ENSCSAG00000007633 Chlorocebus sabaeus ENSCSAG00000007633 I 0.000
TET1 Dasypus novemcinctus ENSDNOG00000018763 I 0.000
ENSECAG00000015450 Equus caballus ENSECAG00000015450 I 0.000
ENSFALG00000013006 Ficedula albicollis ENSFALG00000013006 I 0.000
TET1 Felis catus ENSFCAG00000012673 I 0.000
TET1 Homo sapiens ENSG00000138336 D 0.000
ENSGALG00000004073 Gallus gallus ENSGALG00000004073 I 0.000
TET1 Gorilla gorilla ENSGGOG00000011822 I 0.000
TET1 Loxodonta africana ENSLAFG00000006171 I 0.000
TET1 Meleagris gallopavo ENSMGAG00000004157 I 0.000
ENSMGAG00000004157_CONSTRUCT PBM CONSTRUCTS ENSMGAG00000004157_CONSTRUCT D 0.000
TET1 Macaca mulatta ENSMMUG00000023198 I 0.000
ENSMPUG00000012204 Mustela putorius furo ENSMPUG00000012204 I 0.000
ENSNLEG00000011782 Nomascus leucogenys ENSNLEG00000011782 I 0.000
ENSOANG00000015049 Ornithorhynchus anatinus ENSOANG00000015049 I 0.000
ENSOARG00000005141 Ovis aries ENSOARG00000005141 I 0.000
TET1 Oryctolagus cuniculus ENSOCUG00000013277 I 0.000
TET1 Otolemur garnettii ENSOGAG00000034454 I 0.000
ENSOPRG00000005862 Ochotona princeps ENSOPRG00000005862 I 0.000
ENSP00000362748-D1 Bos grunniens ENSP00000362748-D1 I 0.000
ENSPANG00000022122 Papio anubis ENSPANG00000022122 I 0.000
TET1 Procavia capensis ENSPCAG00000007795 I 0.000
ENSPSIG00000006159 Pelodiscus sinensis ENSPSIG00000006159 I 0.000
TET1 Pan troglodytes ENSPTRG00000002558 I 0.000
TET1 Pteropus vampyrus ENSPVAG00000003593 I 0.000
TET1 Sorex araneus ENSSARG00000011693 I 0.000
ENSTGUG00000003754 Taeniopygia guttata ENSTGUG00000003754 I 0.000
ENSTSYG00000006963 Tarsius syrichta ENSTSYG00000006963 I 0.000
TET1 Tursiops truncatus ENSTTRG00000001566 I 0.000
TET1 Vicugna pacos ENSVPAG00000011820 I 0.000
Gfo_R013982 Geospiza fortis Gfo_R013982 I 0.000
Ogr07249 Ophisaurus gracilis Ogr07249 I 0.000
Sakowv30045758m.g Saccoglossus kowalevskii Sakowv30045758m.g I 0.000