Gfo_R013982 (Geospiza fortis)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 Gfo_R013982 T168614_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSMGAG00000004157_CONSTRUCT
M01920_2.00 		PBM CONSTRUCTS
NNNNRVGBNN
NNVCBYNNNN		 PBM
Weirauch et al.(2014)
pTH9719 		1.000 1.000
TET1
M01914_2.00 		Homo sapiens
NNHVCGHNN
NNDCGBDNN		 PBM
Weirauch et al.(2014)
pTH9605 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R013982 CxxC 8 49

Links

Other CxxC family TFs
Other Geospiza fortis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000015153 Anas platyrhynchos ENSAPLG00000015153 I 1.000
ENSFALG00000013006 Ficedula albicollis ENSFALG00000013006 I 1.000
ENSGALG00000004073 Gallus gallus ENSGALG00000004073 I 1.000
TET1 Meleagris gallopavo ENSMGAG00000004157 I 1.000
ENSPSIG00000006159 Pelodiscus sinensis ENSPSIG00000006159 I 1.000
ENSTGUG00000003754 Taeniopygia guttata ENSTGUG00000003754 I 1.000
Aan_R007733 Calypte anna Aan_R007733 I 1.000
Afo_R009498 Aptenodytes forsteri Afo_R009498 I 1.000
Alligator_sinensis_CCG006997.1 Alligator sinensis Alligator_sinensis_CCG006997.1 I 1.000
Cmyd_10012130 Chelonia mydas Cmyd_10012130 I 1.000
ENSMGAG00000004157_CONSTRUCT PBM CONSTRUCTS ENSMGAG00000004157_CONSTRUCT D 1.000
Ogr07249 Ophisaurus gracilis Ogr07249 I 0.976
Pvit_00547 Pogona vitticeps Pvit_00547 I 0.976
ENSACAG00000010131 Anolis carolinensis ENSACAG00000010131 I 0.952
ENSOPRG00000005862 Ochotona princeps ENSOPRG00000005862 I 0.786
ENSAMEG00000018009 Ailuropoda melanoleuca ENSAMEG00000018009 I 0.762
TET1 Bos taurus ENSBTAG00000037756 I 0.762
TET1 Canis familiaris ENSCAFG00000013739 I 0.762
TET1 Callithrix jacchus ENSCJAG00000019005 I 0.762
ENSCSAG00000007633 Chlorocebus sabaeus ENSCSAG00000007633 I 0.762
TET1 Dasypus novemcinctus ENSDNOG00000018763 I 0.762
TET1 Homo sapiens ENSG00000138336 D 0.762
TET1 Gorilla gorilla ENSGGOG00000011822 I 0.762
TET1 Macaca mulatta ENSMMUG00000023198 I 0.762
ENSMPUG00000012204 Mustela putorius furo ENSMPUG00000012204 I 0.762
ENSNLEG00000011782 Nomascus leucogenys ENSNLEG00000011782 I 0.762
ENSOARG00000005141 Ovis aries ENSOARG00000005141 I 0.762
TET1 Oryctolagus cuniculus ENSOCUG00000013277 I 0.762
TET1 Otolemur garnettii ENSOGAG00000034454 I 0.762
ENSPANG00000022122 Papio anubis ENSPANG00000022122 I 0.762
TET1 Procavia capensis ENSPCAG00000007795 I 0.762
TET1 Pan troglodytes ENSPTRG00000002558 I 0.762
TET1 Sorex araneus ENSSARG00000011693 I 0.762
ENSTSYG00000006963 Tarsius syrichta ENSTSYG00000006963 I 0.762
TET1 Tursiops truncatus ENSTTRG00000001566 I 0.762
TET1 Vicugna pacos ENSVPAG00000011820 I 0.762
ENSP00000362748-D1 Bos grunniens ENSP00000362748-D1 I 0.762
ENSECAG00000015450 Equus caballus ENSECAG00000015450 I 0.738
TET1 Felis catus ENSFCAG00000012673 I 0.738
TET1 Loxodonta africana ENSLAFG00000006171 I 0.738
ENSOANG00000015049 Ornithorhynchus anatinus ENSOANG00000015049 I 0.738
TET1 Pteropus vampyrus ENSPVAG00000003593 I 0.738
Sakowv30045758m.g Saccoglossus kowalevskii Sakowv30045758m.g I 0.738
TET1 Cavia porcellus ENSCPOG00000009306 I 0.714
ENSPPYG00000002393 Pongo abelii ENSPPYG00000002393 I 0.714
Myotis_brandtii_TET1_10018894 Myotis brandtii Myotis_brandtii_TET1_10018894 I 0.714