ACYPI008391 (Acyrthosiphon pisum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACYPI008391 T079750_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.823 0.939
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.823 0.939
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.823 0.939
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.811 0.922
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.811 0.922
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.811 0.922
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.811 0.922
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.793 0.861
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.793 0.861
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.793 0.861
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.793 0.861
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACYPI008391-PA C2H2 ZF 204 226
ACYPI008391-PA C2H2 ZF 232 254
ACYPI008391-PA C2H2 ZF 260 282
ACYPI008391-PA C2H2 ZF 288 310
ACYPI008391-PA C2H2 ZF 316 338

Links

Other C2H2 ZF family TFs
Other Acyrthosiphon pisum TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA012030 Oryza indica BGIOSGA012030 N 0.000
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.000
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.000
F775_08653 Aegilops tauschii F775_08653 N 0.000
F775_26780 Aegilops tauschii F775_26780 N 0.000
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.000
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.000
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.000
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.000
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.000
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.000
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.000
OB03G16920 Oryza brachyantha OB03G16920 N 0.000
OB10G15940 Oryza brachyantha OB10G15940 N 0.000
OBART03G06740 Oryza barthii OBART03G06740 N 0.000
OBART10G07700 Oryza barthii OBART10G07700 N 0.000
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.000
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.000
OLONG_001018 Oryza longistaminata OLONG_001018 N 0.000
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.000
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.000
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.000
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.000
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.000
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.000
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.000
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.000
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.000
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.000
OS03G0193000 Oryza sativa OS03G0193000 N 0.000
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.000
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.000
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.000
Pavir.Ib00589 Panicum virgatum Pavir.Ib00589 N 0.000
Pavir.Ib02999 Panicum virgatum Pavir.Ib02999 N 0.000
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.000
Si035052m.g Setaria italica Si035052m.g N 0.000
Si035089m.g Setaria italica Si035089m.g N 0.000
Traes_4AS_C30034054 Triticum aestivum Traes_4AS_C30034054 N 0.000
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.000
Traes_4DL_E50C77AEC Triticum aestivum Traes_4DL_E50C77AEC N 0.000
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.000
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.000
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.000
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.000
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.000
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.000
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.000
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.000
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.000