OBART10G07700 (Oryza barthii)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 OBART10G07700 T200667_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART10G07700.1 GRAS 191 388
OBART10G07700.2 GRAS 189 559

Links

Other GRAS family TFs
Other Oryza barthii TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 1.000
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 1.000
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 1.000
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.997
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.995
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.995
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.995
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.981
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.954
OB10G15940 Oryza brachyantha OB10G15940 N 0.949
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.894
Si035052m.g Setaria italica Si035052m.g N 0.886
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.886
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.886
F775_26780 Aegilops tauschii F775_26780 N 0.881
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.881
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.881
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.878
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.878
Pavir.Ib02999 Panicum virgatum Pavir.Ib02999 N 0.875
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.867
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.851
BGIOSGA012030 Oryza indica BGIOSGA012030 N 0.848
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.848
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.848
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.848
OS03G0193000 Oryza sativa OS03G0193000 N 0.848
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.846
OB03G16920 Oryza brachyantha OB03G16920 N 0.843
OBART03G06740 Oryza barthii OBART03G06740 N 0.843
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.843
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.843
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.843
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.837
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.835
Pavir.Ib00589 Panicum virgatum Pavir.Ib00589 N 0.832
Si035089m.g Setaria italica Si035089m.g N 0.829
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.829
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.814
F775_08653 Aegilops tauschii F775_08653 N 0.810
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.810
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.810
Traes_4DL_E50C77AEC Triticum aestivum Traes_4DL_E50C77AEC N 0.810
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.808
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.808
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.808
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.724
Pm015021 Prunus mume Pm015021 N 0.721
TCM_002319 Theobroma cacao TCM_002319 N 0.718
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.718
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.718
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.715
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.715
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.715
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.715
Traes_4AS_C30034054 Triticum aestivum Traes_4AS_C30034054 N 0.713
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.713
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.710
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.710
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.710
MDP0000152670 Malus domestica MDP0000152670 N 0.710
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.710
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.710
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.710
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.707
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.707
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.707
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.707
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.707
MDP0000804652 Malus domestica MDP0000804652 N 0.707
PK09018.1 Cannabis sativa PK09018.1 N 0.705
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.702
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.702
Si029418m.g Setaria italica Si029418m.g N 0.702
Ca_09786 Cicer arietinum Ca_09786 N 0.702
Pm012019 Prunus mume Pm012019 N 0.702