CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si029418m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si029418m.g
T201524_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si029418m
GRAS
177
547
LKELLIACARAVEQNNSFAIDLMIPELRKMVSVSGEPLERLGAYMVEGLVARLASSGNSIYKALKCKEPKSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPFVRITGIDDSVSAYARGGGLELVGRRLSHIAGLYKVPFQFNAVAISGNEMEEGHLGIVPGEAVAVNFTLELHHIPDETVSTANHRDRILRLVKSLSPKVLTLVEQESNTNTAPFAQRFAETLDYYTAIFESIDLALPREDRERINMEQHCLAREIVNLVACEGEERVERHEVFGKWKARLMMAGFRPSPLSALVNATIKTLLQSYSPDYKLAERDGVLYLGWKNRPLIVSSAWH
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ba00562
Panicum virgatum
Pavir.Ba00562
N
0.978
Sb02g037650
Sorghum bicolor
Sb02g037650
N
0.965
GRMZM2G431309
Zea mays
GRMZM2G431309
N
0.949
GRMZM2G098517
Zea mays
GRMZM2G098517
N
0.938
OMERI07G16830
Oryza meridionalis
OMERI07G16830
N
0.902
OPUNC07G19030
Oryza punctata
OPUNC07G19030
N
0.902
BRADI1G23350
Brachypodium distachyon
BRADI1G23350
N
0.900
OB07G25870
Oryza brachyantha
OB07G25870
N
0.900
BGIOSGA026022
Oryza indica
BGIOSGA026022
N
0.894
LPERR07G17460
Leersia perrieri
LPERR07G17460
N
0.894
OGLUM07G19910
Oryza glumaepatula
OGLUM07G19910
N
0.894
ONIVA07G18570
Oryza nivara
ONIVA07G18570
N
0.894
ORGLA07G0258500
Oryza glaberrima
ORGLA07G0258500
N
0.894
ORUFI07G20980
Oryza rufipogon
ORUFI07G20980
N
0.894
CIGR2
Oryza sativa
OS07G0583600
N
0.894
MLOC_65838
Hordeum vulgare
MLOC_65838
N
0.892
OBART07G20130
Oryza barthii
OBART07G20130
N
0.892
Traes_2BS_D007D6598
Triticum aestivum
Traes_2BS_D007D6598
N
0.883
Traes_2DS_CCA2FCCAD
Triticum aestivum
Traes_2DS_CCA2FCCAD
N
0.878
F775_28371
Aegilops tauschii
F775_28371
N
0.875
F775_15940
Aegilops tauschii
F775_15940
N
0.843
Traes_5DL_B89CD8432
Triticum aestivum
Traes_5DL_B89CD8432
N
0.840
Traes_5BL_A7C4DAE11
Triticum aestivum
Traes_5BL_A7C4DAE11
N
0.837
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.734
Traes_5BL_1E751EF1F
Triticum aestivum
Traes_5BL_1E751EF1F
N
0.729
27613.m000642
Ricinus communis
27613.m000642
N
0.726
TCM_030733
Theobroma cacao
TCM_030733
N
0.713
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.713
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.710
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.710
Ciclev10007927m.g
Citrus clementina
Ciclev10007927m.g
N
0.710
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.710
Pm015021
Prunus mume
Pm015021
N
0.707
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.707
OMERI10G05450
Oryza meridionalis
OMERI10G05450
N
0.705
TCM_002319
Theobroma cacao
TCM_002319
N
0.705
BGIOSGA032058
Oryza indica
BGIOSGA032058
N
0.702
OBART10G07700
Oryza barthii
OBART10G07700
N
0.702
OGLUM10G07400
Oryza glumaepatula
OGLUM10G07400
N
0.702
OLONG_015869
Oryza longistaminata
OLONG_015869
N
0.702
ORGLA10G0063900
Oryza glaberrima
ORGLA10G0063900
N
0.702
ORUFI10G08100
Oryza rufipogon
ORUFI10G08100
N
0.702
Pm012019
Prunus mume
Pm012019
N
0.702
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.702
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.702
MDP0000152670
Malus domestica
MDP0000152670
N
0.702