MDP0000152670 (Malus domestica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 MDP0000152670 T202808_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000152670 GRAS 175 545

Links

Other GRAS family TFs
Other Malus domestica TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000804652 Malus domestica MDP0000804652 N 0.954
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.951
Pm015021 Prunus mume Pm015021 N 0.951
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.932
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.897
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.892
TCM_002319 Theobroma cacao TCM_002319 N 0.892
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.892
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.889
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.886
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.878
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.878
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.875
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.869
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.867
Ca_09786 Cicer arietinum Ca_09786 N 0.865
29949.m000124 Ricinus communis 29949.m000124 N 0.860
Cla001429 Citrullus lanatus Cla001429 N 0.859
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.859
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.854
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.851
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.851
PK09018.1 Cannabis sativa PK09018.1 N 0.851
Bo9g009240 Brassica oleracea Bo9g009240 N 0.850
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.843
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.840
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.840
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.829
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.824
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.824
PAT1 Arabidopsis thaliana AT5G48150 N 0.821
27613.m000642 Ricinus communis 27613.m000642 N 0.816
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.816
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.813
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.813
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.813
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.810
Bo9g009260 Brassica oleracea Bo9g009260 N 0.808
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.808
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.805
Bra020715 Brassica rapa Bra020715 N 0.799
Bra036185 Brassica rapa Bra036185 N 0.799
Pm012019 Prunus mume Pm012019 N 0.799
Bo2g149670 Brassica oleracea Bo2g149670 N 0.797
TCM_030733 Theobroma cacao TCM_030733 N 0.794
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.791
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.789
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.786
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.783
Bo7g089080 Brassica oleracea Bo7g089080 N 0.781
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.779
Bra037509 Brassica rapa Bra037509 N 0.778
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.778
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.775
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.775
MDP0000205236 Malus domestica MDP0000205236 N 0.775
MDP0000284679 Malus domestica MDP0000284679 N 0.775
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.770
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.767
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.767
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.764
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.764
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.762
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.759
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.753
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.751
PK15082.1 Cannabis sativa PK15082.1 N 0.748
Bra026077 Brassica rapa Bra026077 N 0.747
SCL5 Arabidopsis thaliana AT1G50600 N 0.740
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.740
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.740
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.736
CIGR2 Oryza sativa OS07G0583600 N 0.736
Bo6g022330 Brassica oleracea Bo6g022330 N 0.734
Bra018860 Brassica rapa Bra018860 N 0.734
Ca_13855 Cicer arietinum Ca_13855 N 0.734
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.734
Cla004565 Citrullus lanatus Cla004565 N 0.732
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.728
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.726
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.726
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.726
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.723
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.721
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.719
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.717
SCL21 Arabidopsis thaliana AT2G04890 N 0.715
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.715
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.715
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.715
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.713
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.713
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.713
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.710
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.710
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.710
OBART10G07700 Oryza barthii OBART10G07700 N 0.710
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.710
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.710
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.710
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.710
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.710
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.710
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.710
Bo7g030310 Brassica oleracea Bo7g030310 N 0.709
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.709
Bra015156 Brassica rapa Bra015156 N 0.708
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.707
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.707
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.707
OB07G25870 Oryza brachyantha OB07G25870 N 0.707
OBART07G20130 Oryza barthii OBART07G20130 N 0.707
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.707
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.707
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.707
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.705
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.705
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.703
F775_15940 Aegilops tauschii F775_15940 N 0.702
Si029418m.g Setaria italica Si029418m.g N 0.702
Si035052m.g Setaria italica Si035052m.g N 0.702
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.702
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.702
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.701
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N 0.700