Lus10003772.g (Linum usitatissimum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Lus10003772.g T202686_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003772 GRAS 1 269

Links

Other GRAS family TFs
Other Linum usitatissimum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.955
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.820
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.816
27613.m000642 Ricinus communis 27613.m000642 N 0.809
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.809
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.790
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.787
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.783
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.783
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.779
MDP0000152670 Malus domestica MDP0000152670 N 0.779
MDP0000205236 Malus domestica MDP0000205236 N 0.779
MDP0000284679 Malus domestica MDP0000284679 N 0.779
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.775
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.775
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.775
PK09018.1 Cannabis sativa PK09018.1 N 0.775
Bra020715 Brassica rapa Bra020715 N 0.772
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.772
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.772
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.772
MDP0000804652 Malus domestica MDP0000804652 N 0.772
PAT1 Arabidopsis thaliana AT5G48150 N 0.768
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.768
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.768
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.764
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.764
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.764
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.764
Bo7g089080 Brassica oleracea Bo7g089080 N 0.757
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.757
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.753
Bo9g009260 Brassica oleracea Bo9g009260 N 0.749
Bra036185 Brassica rapa Bra036185 N 0.749
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.749
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.749
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.748
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.745
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.743
Ca_13855 Cicer arietinum Ca_13855 N 0.734
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.734
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.730
Bra037509 Brassica rapa Bra037509 N 0.719
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.708
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.708
SCL5 Arabidopsis thaliana AT1G50600 N 0.704
SCL21 Arabidopsis thaliana AT2G04890 N 0.704
Bo6g022330 Brassica oleracea Bo6g022330 N 0.704
Bra018860 Brassica rapa Bra018860 N 0.704
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.704
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.704
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.704
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.704
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.704
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.700
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.700
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.700
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.700
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.700