chr6.LjT11E14.20.nc (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr6.LjT11E14.20.nc T203289_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr6.LjT11E14.20.nc GRAS 176 546

Links

Other GRAS family TFs
Other Lotus japonicus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_13855 Cicer arietinum Ca_13855 N 0.865
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.859
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.854
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.853
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.846
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.794
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.789
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.757
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.756
Ca_09696 Cicer arietinum Ca_09696 N 0.756
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.743
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.740
Pm012019 Prunus mume Pm012019 N 0.737
27613.m000642 Ricinus communis 27613.m000642 N 0.729
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.721
MDP0000205236 Malus domestica MDP0000205236 N 0.721
MDP0000284679 Malus domestica MDP0000284679 N 0.721
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.715
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.713
Bra026077 Brassica rapa Bra026077 N 0.712
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.710
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.710
MDP0000804652 Malus domestica MDP0000804652 N 0.710
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.708
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.707
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.707
MDP0000152670 Malus domestica MDP0000152670 N 0.707
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.707
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.705
TCM_030733 Theobroma cacao TCM_030733 N 0.705
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.705
Ca_09786 Cicer arietinum Ca_09786 N 0.705
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.705
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.705
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.705
SCL5 Arabidopsis thaliana AT1G50600 N 0.702
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.702
Cla001429 Citrullus lanatus Cla001429 N 0.702
Pm015021 Prunus mume Pm015021 N 0.702
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.702
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.702
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.702