CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA08G43780
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA08G43780
T200173_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA08G43780.1
GRAS
175
545
LKEMLYMCAKAMAVNDMETTDWLVSELRKMVSISGNPIQRLGAYILESFVARIGASGSTIYKSLKCSEPTGNELLSYMNVLYEICPYFKFGYMSANGAIAEALREESEVHIVDFQIGQGTQWVSLIQALARRPVGPPKIRISGVDDSYSAYARRGGLDIVGKRLSALAQSCHVPFEFNAVRVPVTEVQLEDLELRPYEAVAVNFAISLHHVPDESVNSHNHRDRLLRLAKQLSPKVVTLVEQEFSTNNAPFLQRFVETMNYYLAVFESIDTVLPREHKERINVEQHCLAREVVNLIACEGEERVERHELLNKWRMRFTKAGFTPYPLSSVINSSIKDLLQSYHGHYTLEERDGALFLGWMNQVLVASCAWR
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA18G09030
Glycine max
GLYMA18G09030
N
0.940
chr6.LjT11E14.20.nc
Lotus japonicus
chr6.LjT11E14.20.nc
N
0.859
Ca_13855
Cicer arietinum
Ca_13855
N
0.843
MTR_3g056110
Medicago truncatula
MTR_3g056110
N
0.835
GLYMA02G46730
Glycine max
GLYMA02G46730
N
0.789
GLYMA14G01960
Glycine max
GLYMA14G01960
N
0.780
Ca_09696
Cicer arietinum
Ca_09696
N
0.745
MTR_5g094450
Medicago truncatula
MTR_5g094450
N
0.740
Pm012019
Prunus mume
Pm012019
N
0.721
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.718
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.715
MDP0000205236
Malus domestica
MDP0000205236
N
0.715
MDP0000284679
Malus domestica
MDP0000284679
N
0.715
TCM_030733
Theobroma cacao
TCM_030733
N
0.707
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.707
27613.m000642
Ricinus communis
27613.m000642
N
0.707
SCL5
Populus trichocarpa
POPTR_0001s37270
N
0.705
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
0.702
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
0.702
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.702
MDP0000804652
Malus domestica
MDP0000804652
N
0.702
SapurV1A.0030s0420
Salix purpurea
SapurV1A.0030s0420
N
0.702