CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G46730
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA02G46730
T200146_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G46730.1
GRAS
175
545
LKEMLCTCAKTVAVNDMETTEWLMSELRKMVSVSGDPIQRLGAYMLEALVARLASSGSTIYKVLKCKEPTGSELLSHMHLLYEICPYLKFGYMSANGAIAEAMKEESEVHIIDFQINQGIQWVSLIQALAGRPGGPPKIRITGFDDSTSAYAREGGLEIVGARLSTLAQSYNVPFEFHAIRASPTEVELKDLALQPGEAIAVNFAMMLHHVPDESVDSGNHRDRLVRLAKCLSPKIVTLVEQESHTNNLPFFPRFVETMNYYLAIFESIDVALPREHKERINVEQHCLAREVVNLIACEGEERVERHELLKKWRSRFTMAGFAPYPLNSFITCSIKNLQRSYRGHYTLEERDGALCLGWMNQVLITSCAWR
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA14G01960
Glycine max
GLYMA14G01960
N
0.959
GLYMA09G22110
Glycine max
GLYMA09G22110
N
0.915
LjSGA_018703.2
Lotus japonicus
LjSGA_018703.2
N
0.874
Ca_09696
Cicer arietinum
Ca_09696
N
0.832
MTR_5g094450
Medicago truncatula
MTR_5g094450
N
0.821
chr6.LjT11E14.20.nc
Lotus japonicus
chr6.LjT11E14.20.nc
N
0.794
Ca_13855
Cicer arietinum
Ca_13855
N
0.791
GLYMA08G43780
Glycine max
GLYMA08G43780
N
0.789
MTR_3g056110
Medicago truncatula
MTR_3g056110
N
0.789
GLYMA18G09030
Glycine max
GLYMA18G09030
N
0.780
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.753
TCM_030733
Theobroma cacao
TCM_030733
N
0.751
Pm012019
Prunus mume
Pm012019
N
0.743
27613.m000642
Ricinus communis
27613.m000642
N
0.740
SCL5
Populus trichocarpa
POPTR_0001s37270
N
0.734
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
0.734
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
0.734
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.732
Gorai.002G096300
Gossypium raimondii
Gorai.002G096300
N
0.732
SapurV1A.0030s0420
Salix purpurea
SapurV1A.0030s0420
N
0.729
Gorai.009G446100
Gossypium raimondii
Gorai.009G446100
N
0.724
29949.m000124
Ricinus communis
29949.m000124
N
0.722
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.721
MDP0000205236
Malus domestica
MDP0000205236
N
0.721
MDP0000284679
Malus domestica
MDP0000284679
N
0.721
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.718
Ciclev10007927m.g
Citrus clementina
Ciclev10007927m.g
N
0.718
Eucgr.F03523
Eucalyptus grandis
Eucgr.F03523
N
0.718
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
0.718
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.718
cassava34106.m1
Manihot esculenta
cassava34106.m1
N
0.717
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.715
Pm015021
Prunus mume
Pm015021
N
0.715
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.715
PRUPE_ppa004136mg
Prunus persica
PRUPE_ppa004136mg
N
0.713
TCM_002319
Theobroma cacao
TCM_002319
N
0.713
MDP0000804652
Malus domestica
MDP0000804652
N
0.713
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.710
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.710
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
0.710
Bostr.26675s0117
Boechera stricta
Bostr.26675s0117
N
0.710
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.710
MDP0000152670
Malus domestica
MDP0000152670
N
0.710
PK15082.1
Cannabis sativa
PK15082.1
N
0.710
Bra026077
Brassica rapa
Bra026077
N
0.709
SCL5
Arabidopsis lyrata
fgenesh2_kg.1__4145__AT1G50600.1
N
0.707
Ca_09786
Cicer arietinum
Ca_09786
N
0.707
Eucgr.A01051
Eucalyptus grandis
Eucgr.A01051
N
0.707
SCL5
Arabidopsis thaliana
AT1G50600
N
0.705
Solyc07g065270.1
Solanum lycopersicum
Solyc07g065270.1
N
0.705
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
0.705
Bo6g022330
Brassica oleracea
Bo6g022330
N
0.702
Bra018860
Brassica rapa
Bra018860
N
0.702
Cla004565
Citrullus lanatus
Cla004565
N
0.702
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
0.702
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.702