Lus10016596.g (Linum usitatissimum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Lus10016596.g T202711_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016596 GRAS 167 539

Links

Other GRAS family TFs
Other Linum usitatissimum TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.955
27613.m000642 Ricinus communis 27613.m000642 N 0.813
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.813
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.813
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.810
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.810
Pm012019 Prunus mume Pm012019 N 0.794
Bo9g009240 Brassica oleracea Bo9g009240 N 0.790
TCM_030733 Theobroma cacao TCM_030733 N 0.789
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.783
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.783
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.783
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.780
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.780
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.779
TCM_002319 Theobroma cacao TCM_002319 N 0.778
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.775
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.775
Pm015021 Prunus mume Pm015021 N 0.775
MDP0000152670 Malus domestica MDP0000152670 N 0.775
Cla001429 Citrullus lanatus Cla001429 N 0.772
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.772
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.771
MDP0000804652 Malus domestica MDP0000804652 N 0.768
Ca_09786 Cicer arietinum Ca_09786 N 0.767
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.767
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.767
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.764
MDP0000205236 Malus domestica MDP0000205236 N 0.764
MDP0000284679 Malus domestica MDP0000284679 N 0.764
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.764
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.760
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.760
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.760
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.759
29949.m000124 Ricinus communis 29949.m000124 N 0.758
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.757
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.757
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.757
PAT1 Arabidopsis thaliana AT5G48150 N 0.756
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.756
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.752
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.751
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.751
PK09018.1 Cannabis sativa PK09018.1 N 0.748
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.747
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.745
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.745
Bo2g149670 Brassica oleracea Bo2g149670 N 0.743
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.743
Cla004565 Citrullus lanatus Cla004565 N 0.743
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.741
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.741
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.741
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.741
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.741
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.740
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.740
Bra020715 Brassica rapa Bra020715 N 0.739
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.738
Bo9g009260 Brassica oleracea Bo9g009260 N 0.737
Bra036185 Brassica rapa Bra036185 N 0.737
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.737
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.737
Bo7g089080 Brassica oleracea Bo7g089080 N 0.735
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.734
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.732
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.730
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.729
Bra037509 Brassica rapa Bra037509 N 0.726
PK15082.1 Cannabis sativa PK15082.1 N 0.726
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.724
CIGR2 Oryza sativa OS07G0583600 N 0.718
Bra026077 Brassica rapa Bra026077 N 0.716
Ca_13855 Cicer arietinum Ca_13855 N 0.714
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.712
Bo6g022330 Brassica oleracea Bo6g022330 N 0.707
Bra018860 Brassica rapa Bra018860 N 0.707
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.707
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.707
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.706
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.706
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.705
SCL5 Arabidopsis thaliana AT1G50600 N 0.704
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.702
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.702
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.702
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.702
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.702
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.701