29949.m000124 (Ricinus communis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 29949.m000124 T202025_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29949.m000124 GRAS 177 513

Links

Other GRAS family TFs
Other Ricinus communis TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.893
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.893
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.890
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.884
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.881
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.878
TCM_002319 Theobroma cacao TCM_002319 N 0.878
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.875
Pm015021 Prunus mume Pm015021 N 0.875
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.875
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.875
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.869
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.860
MDP0000152670 Malus domestica MDP0000152670 N 0.860
MDP0000804652 Malus domestica MDP0000804652 N 0.860
Ca_09786 Cicer arietinum Ca_09786 N 0.854
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.845
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.836
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.827
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.824
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.824
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.824
PAT1 Arabidopsis thaliana AT5G48150 N 0.821
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.821
PK09018.1 Cannabis sativa PK09018.1 N 0.821
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.818
Bra020715 Brassica rapa Bra020715 N 0.815
Bo2g149670 Brassica oleracea Bo2g149670 N 0.812
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.812
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.812
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.806
27613.m000642 Ricinus communis 27613.m000642 N 0.806
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.806
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.803
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.802
TCM_030733 Theobroma cacao TCM_030733 N 0.800
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.797
Bo9g009260 Brassica oleracea Bo9g009260 N 0.794
Bra036185 Brassica rapa Bra036185 N 0.794
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.794
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.791
Bra037509 Brassica rapa Bra037509 N 0.788
Pm012019 Prunus mume Pm012019 N 0.785
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.785
Bo7g089080 Brassica oleracea Bo7g089080 N 0.782
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.770
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.770
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.767
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.764
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.761
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.758
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.758
MDP0000205236 Malus domestica MDP0000205236 N 0.758
MDP0000284679 Malus domestica MDP0000284679 N 0.758
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.758
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.756
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.755
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.755
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.746
Cla001429 Citrullus lanatus Cla001429 N 0.743
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.743
SCL21 Arabidopsis thaliana AT2G04890 N 0.740
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.740
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.737
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.737
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.734
mgf013039m Mimulus guttatus mgf013039m N 0.731
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.731
Bo7g030310 Brassica oleracea Bo7g030310 N 0.728
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.728
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.726
SCL5 Arabidopsis thaliana AT1G50600 N 0.725
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.725
Bo6g022330 Brassica oleracea Bo6g022330 N 0.722
Bra018860 Brassica rapa Bra018860 N 0.722
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.722
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.719
Ca_13855 Cicer arietinum Ca_13855 N 0.716
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.716
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.716
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.716
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.710
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.710
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.710
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.707
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.701