cassava34106.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava34106.m1 T202085_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava34106.m1 GRAS 177 514

Links

Other GRAS family TFs
Other Manihot esculenta TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.914
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.896
29949.m000124 Ricinus communis 29949.m000124 N 0.893
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.884
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.884
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.875
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.875
MDP0000804652 Malus domestica MDP0000804652 N 0.872
MDP0000152670 Malus domestica MDP0000152670 N 0.869
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.863
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.839
PK09018.1 Cannabis sativa PK09018.1 N 0.836
27613.m000642 Ricinus communis 27613.m000642 N 0.827
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.827
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.824
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.824
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.821
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.821
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.815
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.813
PAT1 Arabidopsis thaliana AT5G48150 N 0.812
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.812
TCM_002319 Theobroma cacao TCM_002319 N 0.810
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.810
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.810
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.807
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.805
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.802
TCM_030733 Theobroma cacao TCM_030733 N 0.801
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.799
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.798
Pm015021 Prunus mume Pm015021 N 0.797
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.791
Bra020715 Brassica rapa Bra020715 N 0.789
Bo9g009260 Brassica oleracea Bo9g009260 N 0.786
Bra036185 Brassica rapa Bra036185 N 0.786
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.786
Bra037509 Brassica rapa Bra037509 N 0.783
Ca_09786 Cicer arietinum Ca_09786 N 0.783
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.783
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.780
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.780
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.780
Bo7g089080 Brassica oleracea Bo7g089080 N 0.777
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.777
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.777
MDP0000205236 Malus domestica MDP0000205236 N 0.768
MDP0000284679 Malus domestica MDP0000284679 N 0.768
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.759
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.753
Cla001429 Citrullus lanatus Cla001429 N 0.751
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.750
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.748
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.743
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.743
SCL21 Arabidopsis thaliana AT2G04890 N 0.738
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.732
Pm012019 Prunus mume Pm012019 N 0.732
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.729
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.729
Bo7g030310 Brassica oleracea Bo7g030310 N 0.726
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.726
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.726
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.724
SCL5 Arabidopsis thaliana AT1G50600 N 0.723
Bo6g022330 Brassica oleracea Bo6g022330 N 0.720
Bra018860 Brassica rapa Bra018860 N 0.720
Bo2g149670 Brassica oleracea Bo2g149670 N 0.718
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.717
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.717
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.717
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.716
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.715
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.711
Ca_13855 Cicer arietinum Ca_13855 N 0.711
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.711
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.708
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.705
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.705
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.702
GLYMA09G01440 Glycine max GLYMA09G01440 N 0.702
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.702
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.702
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.702
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.702
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.702
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.702
CIGR2 Oryza sativa OS07G0583600 N 0.702
mgf013039m Mimulus guttatus mgf013039m N 0.702
chr4.CM0288.500.nc Lotus japonicus chr4.CM0288.500.nc N 0.702