Bra020715 (Brassica rapa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Bra020715 T199989_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra020715.1-P GRAS 126 497

Links

Other GRAS family TFs
Other Brassica rapa TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g149670 Brassica oleracea Bo2g149670 N 0.992
Bo9g009240 Brassica oleracea Bo9g009240 N 0.960
PAT1 Arabidopsis thaliana AT5G48150 N 0.957
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.946
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.946
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.943
Bo9g009260 Brassica oleracea Bo9g009260 N 0.938
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.935
Bra036185 Brassica rapa Bra036185 N 0.930
Bo7g089080 Brassica oleracea Bo7g089080 N 0.919
Bra037509 Brassica rapa Bra037509 N 0.917
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.916
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.827
TCM_002319 Theobroma cacao TCM_002319 N 0.821
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.821
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.821
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.818
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.816
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.816
29949.m000124 Ricinus communis 29949.m000124 N 0.815
Pm015021 Prunus mume Pm015021 N 0.813
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.813
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.810
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.810
Ca_09786 Cicer arietinum Ca_09786 N 0.808
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.805
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.805
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.805
MDP0000804652 Malus domestica MDP0000804652 N 0.802
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.799
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.799
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.799
MDP0000152670 Malus domestica MDP0000152670 N 0.799
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.791
Cla001429 Citrullus lanatus Cla001429 N 0.789
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.789
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.775
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.775
PK09018.1 Cannabis sativa PK09018.1 N 0.775
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.773
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.772
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.768
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.764
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.759
27613.m000642 Ricinus communis 27613.m000642 N 0.753
TCM_030733 Theobroma cacao TCM_030733 N 0.751
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.750
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.743
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.742
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.742
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.740
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.740
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.740
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.739
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.737
Bra015156 Brassica rapa Bra015156 N 0.736
SCL21 Arabidopsis thaliana AT2G04890 N 0.734
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.734
Pm012019 Prunus mume Pm012019 N 0.732
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.732
Bo7g030310 Brassica oleracea Bo7g030310 N 0.731
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.731
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.726
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.725
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.724
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.724
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.718
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.718
Bra026077 Brassica rapa Bra026077 N 0.716
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.715
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.715
MDP0000205236 Malus domestica MDP0000205236 N 0.713
MDP0000284679 Malus domestica MDP0000284679 N 0.713
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.713
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.713
PK15082.1 Cannabis sativa PK15082.1 N 0.705
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.702
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.701
CIGR2 Oryza sativa OS07G0583600 N 0.701