CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr8G03610_001
(
Musa acuminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GSMUA_Achr8G03610_001
T200396_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr8P03610_001
GRAS
1
144
MVKGLSPRVTTLVEQESNTNTTSFLTRFMETLEYYSAMLESIDATLPRDSKERINVEQHCLAKDIVNIIACEGKERVERHELLGKWRSRLSMAGFKPYPLSSYVNSVIKTLLGYYSDKYTLVEKDGAMLLGWKNRNLISASAWH
Links
Other
GRAS
family TFs
Other
Musa acuminata
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDK_20s1421311g003
Phoenix dactylifera
PDK_20s1421311g003
N
0.910
Traes_2BS_4600D4B54
Triticum aestivum
Traes_2BS_4600D4B54
N
0.875
F775_07373
Aegilops tauschii
F775_07373
N
0.868
Si029156m.g
Setaria italica
Si029156m.g
N
0.868
Traes_2DS_2D035BAFD
Triticum aestivum
Traes_2DS_2D035BAFD
N
0.868
OPUNC07G16570
Oryza punctata
OPUNC07G16570
N
0.861
Pavir.J35699
Panicum virgatum
Pavir.J35699
N
0.861
BGIOSGA025902
Oryza indica
BGIOSGA025902
N
0.847
OB07G23640
Oryza brachyantha
OB07G23640
N
0.847
OGLUM07G17420
Oryza glumaepatula
OGLUM07G17420
N
0.847
OLONG_024541
Oryza longistaminata
OLONG_024541
N
0.847
ONIVA07G16090
Oryza nivara
ONIVA07G16090
N
0.847
ORUFI07G18480
Oryza rufipogon
ORUFI07G18480
N
0.847
GSMUA_Achr6G24310_001
Musa acuminata
GSMUA_Achr6G24310_001
N
0.833
TCM_031132
Theobroma cacao
TCM_031132
N
0.819
Gorai.002G080600
Gossypium raimondii
Gorai.002G080600
N
0.819
GLYMA12G34420
Glycine max
GLYMA12G34420
N
0.812
PRUPE_ppa003323mg
Prunus persica
PRUPE_ppa003323mg
N
0.812
VIT_19s0014g04940
Vitis vinifera
VIT_19s0014g04940
N
0.812
Gorai.013G164700
Gossypium raimondii
Gorai.013G164700
N
0.812
MDP0000205622
Malus domestica
MDP0000205622
N
0.806
MTR_2g082090
Medicago truncatula
MTR_2g082090
N
0.792
Solyc07g063940.1
Solanum lycopersicum
Solyc07g063940.1
N
0.785
Ca_06943
Cicer arietinum
Ca_06943
N
0.785
Gorai.009G427800
Gossypium raimondii
Gorai.009G427800
N
0.785
Lus10035840.g
Linum usitatissimum
Lus10035840.g
N
0.785
Cucsa.053270
Cucumis sativus
Cucsa.053270
N
0.778
PK07026.1
Cannabis sativa
PK07026.1
N
0.778
PGSC0003DMG400019232
Solanum tuberosum
PGSC0003DMG400019232
N
0.771
PGSC0003DMG400021802
Solanum tuberosum
PGSC0003DMG400021802
N
0.771
POPTR_0001s44090
Populus trichocarpa
POPTR_0001s44090
N
0.771
Lus10036623.g
Linum usitatissimum
Lus10036623.g
N
0.771
evm.TU.supercontig_3097.1
Carica papaya
evm.TU.supercontig_3097.1
N
0.769
POPTR_0011s13460
Populus trichocarpa
POPTR_0011s13460
N
0.764
Aquca_005_00404
Aquilegia coerulea
Aquca_005_00404
N
0.764
Ciclev10007843m.g
Citrus clementina
Ciclev10007843m.g
N
0.764
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.750
Lus10003772.g
Linum usitatissimum
Lus10003772.g
N
0.743
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
0.743
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.736
MDP0000152670
Malus domestica
MDP0000152670
N
0.736
MDP0000804652
Malus domestica
MDP0000804652
N
0.736
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.729
PAT1
Arabidopsis thaliana
AT5G48150
N
0.722
PAT1
Arabidopsis lyrata
scaffold_801100.1
N
0.722
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.722
Bo9g009260
Brassica oleracea
Bo9g009260
N
0.715
Bra036185
Brassica rapa
Bra036185
N
0.715
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.715
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.715
Aquca_028_00248
Aquilegia coerulea
Aquca_028_00248
N
0.715
Bostr.5224s0004
Boechera stricta
Bostr.5224s0004
N
0.715
Cagra.2766s0005
Capsella grandiflora
Cagra.2766s0005
N
0.715
Carubv10026289m.g
Capsella rubella
Carubv10026289m.g
N
0.715
AMTR_s00088p00161000
Amborella trichopoda
AMTR_s00088p00161000
N
0.708
Bo7g089080
Brassica oleracea
Bo7g089080
N
0.708
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.708
Thhalv10004053m.g
Eutrema salsugineum
Thhalv10004053m.g
N
0.708
PK09018.1
Cannabis sativa
PK09018.1
N
0.708
Bra020715
Brassica rapa
Bra020715
N
0.701
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.701
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.701