Bo9g009260 (Brassica oleracea)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Bo9g009260 T199959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g009260.1 GRAS 124 495

Links

Other GRAS family TFs
Other Brassica oleracea TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra036185 Brassica rapa Bra036185 N 0.981
PAT1 Arabidopsis thaliana AT5G48150 N 0.949
Bo2g149670 Brassica oleracea Bo2g149670 N 0.946
Bra020715 Brassica rapa Bra020715 N 0.938
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.938
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.938
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.932
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.927
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.911
Bo7g089080 Brassica oleracea Bo7g089080 N 0.902
Bra037509 Brassica rapa Bra037509 N 0.878
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.824
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.821
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.821
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.821
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.821
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.818
Pm015021 Prunus mume Pm015021 N 0.816
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.816
TCM_002319 Theobroma cacao TCM_002319 N 0.813
Cla001429 Citrullus lanatus Cla001429 N 0.813
MDP0000804652 Malus domestica MDP0000804652 N 0.810
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.808
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.808
MDP0000152670 Malus domestica MDP0000152670 N 0.808
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.805
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.805
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.805
Ca_09786 Cicer arietinum Ca_09786 N 0.802
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.802
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.794
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.794
29949.m000124 Ricinus communis 29949.m000124 N 0.794
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.786
PK09018.1 Cannabis sativa PK09018.1 N 0.775
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.772
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.772
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.765
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.764
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.762
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.756
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.749
TCM_030733 Theobroma cacao TCM_030733 N 0.748
27613.m000642 Ricinus communis 27613.m000642 N 0.748
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.743
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.740
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.737
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.737
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.736
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.736
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.732
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.732
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.732
SCL21 Arabidopsis thaliana AT2G04890 N 0.729
Pm012019 Prunus mume Pm012019 N 0.729
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.729
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.726
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.725
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.724
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.724
Bra015156 Brassica rapa Bra015156 N 0.723
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.721
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.718
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.718
MDP0000205236 Malus domestica MDP0000205236 N 0.718
MDP0000284679 Malus domestica MDP0000284679 N 0.718
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.715
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.715
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.713
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.713
Bra026077 Brassica rapa Bra026077 N 0.712
Bo7g030310 Brassica oleracea Bo7g030310 N 0.710
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.710
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.710
PK15082.1 Cannabis sativa PK15082.1 N 0.710
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.710