CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra015156
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra015156
T199981_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra015156.1-P
GRAS
1
318
MLEGLVARLATTGSSIYKSLQSREPESCDFLSYDYLLHEVCPYFKFGYMSANGAIVEAMKDEERIHIIDFEIGEGSQWVALIQAFSARPGGAPNIRIIGIGDGSKLVAVRRRLEKLAKKFDVPFNFHPVSVSSCEVEAENLDARIGEALGVNFAYMLHHLPDESVSTENHRDRVLRIVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVILPRNHKERINVEQHCLASNVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSVVSATIRALLKYYNNGYGIEERDGALYLGWMDRILVSSCA
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g030310
Brassica oleracea
Bo7g030310
N
0.931
Thhalv10002541m.g
Eutrema salsugineum
Thhalv10002541m.g
N
0.880
SCL21
Arabidopsis thaliana
AT2G04890
N
0.877
Carubv10015685m.g
Capsella rubella
Carubv10015685m.g
N
0.862
Bostr.19424s0023
Boechera stricta
Bostr.19424s0023
N
0.769
SCL21
Arabidopsis lyrata
scaffold_303269.1
N
0.761
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
0.739
Bra020715
Brassica rapa
Bra020715
N
0.736
Cagra.1158s0007
Capsella grandiflora
Cagra.1158s0007
N
0.736
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.736
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.733
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.730
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.730
Cagra.2766s0005
Capsella grandiflora
Cagra.2766s0005
N
0.730
Carubv10026289m.g
Capsella rubella
Carubv10026289m.g
N
0.730
PAT1
Arabidopsis thaliana
AT5G48150
N
0.723
Bo9g009260
Brassica oleracea
Bo9g009260
N
0.723
Bra036185
Brassica rapa
Bra036185
N
0.723
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.723
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
0.723
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.723
PAT1
Arabidopsis lyrata
scaffold_801100.1
N
0.717
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.717
Bostr.5224s0004
Boechera stricta
Bostr.5224s0004
N
0.717
MDP0000804652
Malus domestica
MDP0000804652
N
0.717
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
0.717
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.714
Thhalv10004053m.g
Eutrema salsugineum
Thhalv10004053m.g
N
0.711
Bo7g089080
Brassica oleracea
Bo7g089080
N
0.708
27613.m000642
Ricinus communis
27613.m000642
N
0.708
MDP0000152670
Malus domestica
MDP0000152670
N
0.708
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.704
Aquca_028_00248
Aquilegia coerulea
Aquca_028_00248
N
0.704
PK09018.1
Cannabis sativa
PK09018.1
N
0.701