Bra036185 (Brassica rapa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Bra036185 T200010_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra036185.1-P GRAS 124 495

Links

Other GRAS family TFs
Other Brassica rapa TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g009260 Brassica oleracea Bo9g009260 N 0.981
PAT1 Arabidopsis thaliana AT5G48150 N 0.940
Bo2g149670 Brassica oleracea Bo2g149670 N 0.938
Bra020715 Brassica rapa Bra020715 N 0.930
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.930
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.930
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.924
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.919
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.905
Bo7g089080 Brassica oleracea Bo7g089080 N 0.902
Bra037509 Brassica rapa Bra037509 N 0.878
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.824
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.821
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.821
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.816
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.816
TCM_002319 Theobroma cacao TCM_002319 N 0.813
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.813
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.810
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.808
Pm015021 Prunus mume Pm015021 N 0.808
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.808
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.805
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.805
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.805
Ca_09786 Cicer arietinum Ca_09786 N 0.802
Cla001429 Citrullus lanatus Cla001429 N 0.802
MDP0000804652 Malus domestica MDP0000804652 N 0.802
MDP0000152670 Malus domestica MDP0000152670 N 0.799
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.797
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.794
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.794
29949.m000124 Ricinus communis 29949.m000124 N 0.794
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.786
PK09018.1 Cannabis sativa PK09018.1 N 0.772
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.770
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.770
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.764
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.762
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.756
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.756
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.749
TCM_030733 Theobroma cacao TCM_030733 N 0.748
27613.m000642 Ricinus communis 27613.m000642 N 0.748
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.743
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.737
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.737
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.734
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.732
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.732
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.731
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.731
Pm012019 Prunus mume Pm012019 N 0.729
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.729
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.729
SCL21 Arabidopsis thaliana AT2G04890 N 0.724
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.724
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.724
Bra015156 Brassica rapa Bra015156 N 0.723
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.721
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.720
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.715
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.715
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.715
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.715
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.713
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.713
MDP0000205236 Malus domestica MDP0000205236 N 0.713
MDP0000284679 Malus domestica MDP0000284679 N 0.713
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.713
Bo7g030310 Brassica oleracea Bo7g030310 N 0.710
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.710
Bra026077 Brassica rapa Bra026077 N 0.709
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.707
PK15082.1 Cannabis sativa PK15082.1 N 0.707
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.705