PGSC0003DMG400006132 (Solanum tuberosum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 PGSC0003DMG400006132 T201111_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400015695 GRAS 165 535
PGSC0003DMT400015696 GRAS 165 535

Links

Other GRAS family TFs
Other Solanum tuberosum TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.995
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.856
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.854
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.854
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.851
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.851
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.848
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.846
TCM_002319 Theobroma cacao TCM_002319 N 0.846
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.846
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.846
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.843
Ca_09786 Cicer arietinum Ca_09786 N 0.843
Pm015021 Prunus mume Pm015021 N 0.843
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.840
MDP0000152670 Malus domestica MDP0000152670 N 0.840
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.832
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.829
MDP0000804652 Malus domestica MDP0000804652 N 0.827
Cla001429 Citrullus lanatus Cla001429 N 0.824
PK09018.1 Cannabis sativa PK09018.1 N 0.818
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.816
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.810
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.810
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.810
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.810
PAT1 Arabidopsis thaliana AT5G48150 N 0.808
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.805
Bo2g149670 Brassica oleracea Bo2g149670 N 0.799
Bra020715 Brassica rapa Bra020715 N 0.799
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.799
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.799
27613.m000642 Ricinus communis 27613.m000642 N 0.797
Bo9g009260 Brassica oleracea Bo9g009260 N 0.794
Bra036185 Brassica rapa Bra036185 N 0.794
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.794
Pm012019 Prunus mume Pm012019 N 0.789
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.789
TCM_030733 Theobroma cacao TCM_030733 N 0.786
Bo7g089080 Brassica oleracea Bo7g089080 N 0.783
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.780
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.778
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.775
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.775
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.770
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.767
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.767
MDP0000205236 Malus domestica MDP0000205236 N 0.767
MDP0000284679 Malus domestica MDP0000284679 N 0.767
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.764
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.762
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.759
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.759
29949.m000124 Ricinus communis 29949.m000124 N 0.756
Bra037509 Brassica rapa Bra037509 N 0.753
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.753
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.748
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.748
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.743
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.743
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.743
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.740
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.740
mgf013039m Mimulus guttatus mgf013039m N 0.734
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.721
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.721
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.721
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.718
SCL5 Arabidopsis thaliana AT1G50600 N 0.715
SCL21 Arabidopsis thaliana AT2G04890 N 0.715
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.715
OBART10G07700 Oryza barthii OBART10G07700 N 0.715
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.715
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.715
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.715
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.715
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.715
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.713
Bo7g030310 Brassica oleracea Bo7g030310 N 0.713
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.713
Bo6g022330 Brassica oleracea Bo6g022330 N 0.710
Bra018860 Brassica rapa Bra018860 N 0.710
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.710
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.710
Cla004565 Citrullus lanatus Cla004565 N 0.710
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.710
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.707
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.707
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.707
PK15082.1 Cannabis sativa PK15082.1 N 0.707
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.705
Ca_13855 Cicer arietinum Ca_13855 N 0.705
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.705
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.705
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.702
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.702
OB07G25870 Oryza brachyantha OB07G25870 N 0.702
OB10G15940 Oryza brachyantha OB10G15940 N 0.702
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.702
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.702
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.702
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.702
CIGR2 Oryza sativa OS07G0583600 N 0.702
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.702
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.702