CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Eucgr.F03523
(
Eucalyptus grandis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Eucgr.F03523
T202459_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.F03523.1
GRAS
145
515
LKEILCACAKAVEDNDTLKIECLISELRPMVSVSGDPIQRLSAYMLEGLIARLACSGSSIYKALKCKEPAGAELLSYMHILYDICPYFKFGYMSANGSIADVMKDENSIHIIDFQIAQGGQWITLIQALAARPGGPPCIRITGIDDSRSAYSRGGGLEIVGQRLSRLAEACRVPFQFHACGVPASEVEIGNLPIRADEAIAVNFPLLLHHIPDESVCSQNHRDRLIRMAKSLSPKVVTLVEQESNTNTVPFFPRFLETLNYYLSVFESIDMALPREHKERVNVEQHCLARDIVNLIACEGMERVERHELLGKWRMRFIMAGFSPYPLSSFVNATIKSLLSSYCDKYSLEERDGALYLGWMNRPLVASCAWR
Links
Other
GRAS
family TFs
Other
Eucalyptus grandis
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm012019
Prunus mume
Pm012019
N
0.775
27613.m000642
Ricinus communis
27613.m000642
N
0.775
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.775
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.772
TCM_030733
Theobroma cacao
TCM_030733
N
0.767
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
0.767
MDP0000205236
Malus domestica
MDP0000205236
N
0.767
MDP0000284679
Malus domestica
MDP0000284679
N
0.767
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.759
SCL5
Populus trichocarpa
POPTR_0001s37270
N
0.759
Gorai.009G446100
Gossypium raimondii
Gorai.009G446100
N
0.756
TCM_002319
Theobroma cacao
TCM_002319
N
0.753
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.753
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.753
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.753
PRUPE_ppa004136mg
Prunus persica
PRUPE_ppa004136mg
N
0.751
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.751
SapurV1A.0030s0420
Salix purpurea
SapurV1A.0030s0420
N
0.751
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
0.748
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
0.748
Gorai.002G096300
Gossypium raimondii
Gorai.002G096300
N
0.748
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.745
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
0.743
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.743
Solyc07g065270.1
Solanum lycopersicum
Solyc07g065270.1
N
0.743
Pm015021
Prunus mume
Pm015021
N
0.743
29949.m000124
Ricinus communis
29949.m000124
N
0.743
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.740
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
0.740
MDP0000152670
Malus domestica
MDP0000152670
N
0.740
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.737
PGSC0003DMG400022187
Solanum tuberosum
PGSC0003DMG400022187
N
0.737
Ciclev10007927m.g
Citrus clementina
Ciclev10007927m.g
N
0.737
MDP0000804652
Malus domestica
MDP0000804652
N
0.737
Ca_09786
Cicer arietinum
Ca_09786
N
0.734
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
0.734
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.734
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.732
PK09018.1
Cannabis sativa
PK09018.1
N
0.729
Cla004565
Citrullus lanatus
Cla004565
N
0.726
Eucgr.A01051
Eucalyptus grandis
Eucgr.A01051
N
0.726
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.726
Ciclev10014845m.g
Citrus clementina
Ciclev10014845m.g
N
0.721
GLYMA02G46730
Glycine max
GLYMA02G46730
N
0.718
GLYMA14G01960
Glycine max
GLYMA14G01960
N
0.718
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
0.718
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
0.718
PAT1
Arabidopsis thaliana
AT5G48150
N
0.715
Cla001429
Citrullus lanatus
Cla001429
N
0.715
PK15082.1
Cannabis sativa
PK15082.1
N
0.715
SCL5
Arabidopsis thaliana
AT1G50600
N
0.713
Bo6g022330
Brassica oleracea
Bo6g022330
N
0.713
Bra018860
Brassica rapa
Bra018860
N
0.713
SCL5
Arabidopsis lyrata
fgenesh2_kg.1__4145__AT1G50600.1
N
0.713
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
0.713
Aquca_028_00248
Aquilegia coerulea
Aquca_028_00248
N
0.713
Cagra.2766s0005
Capsella grandiflora
Cagra.2766s0005
N
0.713
Carubv10026289m.g
Capsella rubella
Carubv10026289m.g
N
0.713
Bostr.26675s0117
Boechera stricta
Bostr.26675s0117
N
0.710
Bostr.5224s0004
Boechera stricta
Bostr.5224s0004
N
0.707
Thhalv10011379m.g
Eutrema salsugineum
Thhalv10011379m.g
N
0.707
PAT1
Arabidopsis lyrata
scaffold_801100.1
N
0.705
Ca_13855
Cicer arietinum
Ca_13855
N
0.705
Cucsa.042310
Cucumis sativus
Cucsa.042310
N
0.705
Cagra.7055s0004
Capsella grandiflora
Cagra.7055s0004
N
0.705
Carubv10008830m.g
Capsella rubella
Carubv10008830m.g
N
0.705
AMTR_s00088p00161000
Amborella trichopoda
AMTR_s00088p00161000
N
0.702