27613.m000642 (Ricinus communis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 27613.m000642 T201993_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
27613.m000642 GRAS 168 538

Links

Other GRAS family TFs
Other Ricinus communis TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.889
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.881
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.846
TCM_030733 Theobroma cacao TCM_030733 N 0.843
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.840
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.835
Pm012019 Prunus mume Pm012019 N 0.835
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.827
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.827
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.824
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.821
Pm015021 Prunus mume Pm015021 N 0.821
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.821
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.818
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.818
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.818
MDP0000205236 Malus domestica MDP0000205236 N 0.818
MDP0000284679 Malus domestica MDP0000284679 N 0.818
TCM_002319 Theobroma cacao TCM_002319 N 0.816
MDP0000152670 Malus domestica MDP0000152670 N 0.816
MDP0000804652 Malus domestica MDP0000804652 N 0.816
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.813
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.813
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.813
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.813
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.810
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.810
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.809
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.808
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.808
29949.m000124 Ricinus communis 29949.m000124 N 0.806
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.805
Ca_09786 Cicer arietinum Ca_09786 N 0.805
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.802
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.799
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.799
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.797
Cla001429 Citrullus lanatus Cla001429 N 0.794
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.794
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.789
PK09018.1 Cannabis sativa PK09018.1 N 0.789
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.786
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.783
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.783
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.775
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.775
PAT1 Arabidopsis thaliana AT5G48150 N 0.772
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.772
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.770
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.770
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.770
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.770
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.769
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.767
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.765
Bra026077 Brassica rapa Bra026077 N 0.764
PK15082.1 Cannabis sativa PK15082.1 N 0.764
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.759
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.756
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.756
SCL5 Arabidopsis thaliana AT1G50600 N 0.753
Bo2g149670 Brassica oleracea Bo2g149670 N 0.753
Bra020715 Brassica rapa Bra020715 N 0.753
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.753
Cla004565 Citrullus lanatus Cla004565 N 0.753
Bo6g022330 Brassica oleracea Bo6g022330 N 0.751
Bra018860 Brassica rapa Bra018860 N 0.751
Bo9g009260 Brassica oleracea Bo9g009260 N 0.748
Bra036185 Brassica rapa Bra036185 N 0.748
CIGR2 Oryza sativa OS07G0583600 N 0.748
Ca_13855 Cicer arietinum Ca_13855 N 0.748
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.748
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.748
Bo7g089080 Brassica oleracea Bo7g089080 N 0.745
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.745
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.743
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.743
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.743
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.740
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.734
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.732
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.732
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.732
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.729
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.729
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.726
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.726
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.726
Si029418m.g Setaria italica Si029418m.g N 0.726
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.726
Bra037509 Brassica rapa Bra037509 N 0.724
OB07G25870 Oryza brachyantha OB07G25870 N 0.724
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.724
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.724
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.723
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.721
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.721
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.721
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.721
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.721
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.721
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.721
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.718
GRMZM2G098517 Zea mays GRMZM2G098517 N 0.718
OBART07G20130 Oryza barthii OBART07G20130 N 0.718
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.718
Ca_09696 Cicer arietinum Ca_09696 N 0.718
F775_28371 Aegilops tauschii F775_28371 N 0.715
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.715
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.712
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.712
F775_15940 Aegilops tauschii F775_15940 N 0.710
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.709
Pavir.Bb03224 Panicum virgatum Pavir.Bb03224 N 0.709
Bra015156 Brassica rapa Bra015156 N 0.708
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.707
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N 0.705
SCL21 Arabidopsis thaliana AT2G04890 N 0.702
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.702