CBN31040 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN31040 T083097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-3
M00640_2.00 		Caenorhabditis elegans
DGTGTGTR
YACACACH		 PBM
Narasimhan et al.(2015)
pTH10629 		0.768 0.889
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN31040 C2H2 ZF 233 255
CBN31040 C2H2 ZF 261 282

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA01054 Caenorhabditis japonica CJA01054 I 0.806
CRE20982 Caenorhabditis remanei CRE20982 I 0.788
ztf-3 Caenorhabditis elegans WBGene00016905 D 0.768