CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CERSUDRAFT_49663
(
Ceriporiopsis subvermispora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CERSUDRAFT_49663
T083257_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD37854
C2H2 ZF
1
23
CPVPGCGSTFTRRFNLRGHLRSH
EMD37854
C2H2 ZF
29
53
FMCEWPGCNKGFARQHDCKRHQALH
EMD37854
C2H2 ZF
61
77
ACQGCGKTFSRLDALNV
Links
Other
C2H2 ZF
family TFs
Other
Ceriporiopsis subvermispora
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LBD23
Arabidopsis thaliana
AT3G26620
D
LBD24
Arabidopsis thaliana
AT3G26660
I
Bo3g065910
Brassica oleracea
Bo3g065910
I
Bo7g083780
Brassica oleracea
Bo7g083780
I
Bostr.0556s0333
Boechera stricta
Bostr.0556s0333
I
Bra025217
Brassica rapa
Bra025217
I
Bra032938
Brassica rapa
Bra032938
I
Cagra.3598s0013
Capsella grandiflora
Cagra.3598s0013
I
Carubv10018979m.g
Capsella rubella
Carubv10018979m.g
I
cassava35977.valid.m1
Manihot esculenta
cassava35977.valid.m1
I
evm.TU.supercontig_1.335
Carica papaya
evm.TU.supercontig_1.335
I
evm.TU.supercontig_1.339
Carica papaya
evm.TU.supercontig_1.339
I
Gorai.009G123600
Gossypium raimondii
Gorai.009G123600
N
POPTR_0012s13910
Populus trichocarpa
POPTR_0012s13910
I
POPTR_0015s13870
Populus trichocarpa
POPTR_0015s13870
N
SapurV1A.0400s0200
Salix purpurea
SapurV1A.0400s0200
I
scaffold_500562.1
Arabidopsis lyrata
scaffold_500562.1
I
TCM_035123
Theobroma cacao
TCM_035123
N
Thhalv10005497m.g
Eutrema salsugineum
Thhalv10005497m.g
I
Thhalv10015971m.g
Eutrema salsugineum
Thhalv10015971m.g
I