CGI_10001094 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10001094 T083388_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.769 0.804
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.769 0.804
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.769 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC17337 C2H2 ZF 17 39
EKC17337 C2H2 ZF 45 67
EKC17337 C2H2 ZF 73 95
EKC17337 C2H2 ZF 101 124

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00142p00045170 Amborella trichopoda AMTR_s00142p00045170 N
Cla015679 Citrullus lanatus Cla015679 N
Cucsa.358990 Cucumis sativus Cucsa.358990 N
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N
Gorai.011G076900 Gossypium raimondii Gorai.011G076900 N
Lus10035893.g Linum usitatissimum Lus10035893.g N
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N
PK03816.1 Cannabis sativa PK03816.1 N
Pm013502 Prunus mume Pm013502 N
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N
TCM_028688 Theobroma cacao TCM_028688 N
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N