CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G076900
(
Gossypium raimondii
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Gorai.011G076900
T250724_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G076900.1
MADF
183
252
LQCGRKSLRTEEWQEVAEKVSEISKIERTETQCRNRLDTLKKKYKKEKAMLTETGGTTSKWVYFKKMDML
Links
Other
MADF
family TFs
Other
Gossypium raimondii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.010G228000
Gossypium raimondii
Gorai.010G228000
N
0.901
PGSC0003DMG400031382
Solanum tuberosum
PGSC0003DMG400031382
N
0.892
VIT_09s0002g04700
Vitis vinifera
VIT_09s0002g04700
N
0.885
TCM_028688
Theobroma cacao
TCM_028688
N
0.878
Aquca_020_00179
Aquilegia coerulea
Aquca_020_00179
N
0.877
29872.m000548
Ricinus communis
29872.m000548
N
0.863
Gorai.009G133300
Gossypium raimondii
Gorai.009G133300
N
0.858
Gorai.006G098600
Gossypium raimondii
Gorai.006G098600
N
0.855
Ciclev10025757m.g
Citrus clementina
Ciclev10025757m.g
N
0.836
orange1.1g048259m.g
Citrus sinensis
orange1.1g048259m.g
N
0.836
cassava1476.valid.m1
Manihot esculenta
cassava1476.valid.m1
N
0.830
gene05956-v1.0-hybrid
Fragaria vesca
gene05956-v1.0-hybrid
N
0.825