cassava1476.valid.m1 (Manihot esculenta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 cassava1476.valid.m1 T250457_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava1476.valid.m1 MADF 177 250

Links

Other MADF family TFs
Other Manihot esculenta TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29872.m000548 Ricinus communis 29872.m000548 N 0.954
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N 0.949
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N 0.947
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N 0.947
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N 0.947
PK03816.1 Cannabis sativa PK03816.1 N 0.946
gene05956-v1.0-hybrid Fragaria vesca gene05956-v1.0-hybrid N 0.943
TCM_028688 Theobroma cacao TCM_028688 N 0.935
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N 0.925
Cla015679 Citrullus lanatus Cla015679 N 0.925
Pm013502 Prunus mume Pm013502 N 0.925
Cucsa.358990 Cucumis sativus Cucsa.358990 N 0.925
MDP0000276691 Malus domestica MDP0000276691 N 0.919
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N 0.912
Lus10025772.g Linum usitatissimum Lus10025772.g N 0.905
Gorai.009G133300 Gossypium raimondii Gorai.009G133300 N 0.903
MDP0000500940 Malus domestica MDP0000500940 N 0.898
Lus10035893.g Linum usitatissimum Lus10035893.g N 0.894
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N 0.890
mgf024433m Mimulus guttatus mgf024433m N 0.888
MTR_2g102227 Medicago truncatula MTR_2g102227 N 0.883
POPTR_0003s05470 Populus trichocarpa POPTR_0003s05470 N 0.883
GLYMA15G01730 Glycine max GLYMA15G01730 N 0.857
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N 0.838
Pm027397 Prunus mume Pm027397 N 0.833
Gorai.011G076900 Gossypium raimondii Gorai.011G076900 N 0.830
GLYMA13G43651 Glycine max GLYMA13G43651 N 0.826
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N 0.819
POPTR_0001s18000 Populus trichocarpa POPTR_0001s18000 N 0.819
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N 0.819
SapurV1A.3798s0010 Salix purpurea SapurV1A.3798s0010 N 0.819
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N 0.814