POPTR_0003s05470 (Populus trichocarpa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 POPTR_0003s05470 T249665_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s05470.1 MADF 192 265

Links

Other MADF family TFs
Other Populus trichocarpa TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N 0.940
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N 0.937
SapurV1A.3798s0010 Salix purpurea SapurV1A.3798s0010 N 0.937
POPTR_0001s18000 Populus trichocarpa POPTR_0001s18000 N 0.933
gene05956-v1.0-hybrid Fragaria vesca gene05956-v1.0-hybrid N 0.918
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N 0.906
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N 0.896
29872.m000548 Ricinus communis 29872.m000548 N 0.894
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N 0.893
Pm013502 Prunus mume Pm013502 N 0.893
MDP0000276691 Malus domestica MDP0000276691 N 0.890
Cla015679 Citrullus lanatus Cla015679 N 0.889
Cucsa.358990 Cucumis sativus Cucsa.358990 N 0.889
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N 0.885
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N 0.885
cassava1476.valid.m1 Manihot esculenta cassava1476.valid.m1 N 0.883
mgf024433m Mimulus guttatus mgf024433m N 0.876
Lus10025772.g Linum usitatissimum Lus10025772.g N 0.876
TCM_028688 Theobroma cacao TCM_028688 N 0.873
MDP0000500940 Malus domestica MDP0000500940 N 0.865
Lus10035893.g Linum usitatissimum Lus10035893.g N 0.862
MDP0000260359 Malus domestica MDP0000260359 N 0.855
MDP0000578820 Malus domestica MDP0000578820 N 0.855
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N 0.849
MTR_2g102227 Medicago truncatula MTR_2g102227 N 0.838
PK03816.1 Cannabis sativa PK03816.1 N 0.834
Gorai.009G133300 Gossypium raimondii Gorai.009G133300 N 0.817
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N 0.813
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N 0.812