CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCCADRAFT_81622
(
Bipolaris zeicola
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
COCCADRAFT_81622
T084059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.822
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EUC38982
C2H2 ZF
299
321
YICSTCNKAFSRPSSLRIHSHSH
EUC38982
C2H2 ZF
327
352
YKCPQPGCGKAFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Bipolaris zeicola
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA012273
Oryza indica
BGIOSGA012273
N
0.000
OGLUM03G11450
Oryza glumaepatula
OGLUM03G11450
N
0.000
ONIVA03G12680
Oryza nivara
ONIVA03G12680
N
0.000
OPUNC03G11040
Oryza punctata
OPUNC03G11040
N
0.000
ORGLA03G0111000
Oryza glaberrima
ORGLA03G0111000
N
0.000
ORUFI03G11840
Oryza rufipogon
ORUFI03G11840
N
0.000