CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLF5
(
Anolis carolinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSACAG00000000949
T085846_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Klf5
M08965_2.00
Mus musculus
KCCMCDCCCHBBBCH
DGVVVDGGGHGKGGM
Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A
0.824
0.957
KLF5
M04410_2.00
Homo sapiens
NMCACRCCCH
DGGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX
0.808
0.942
KLF5
M08086_2.00
Homo sapiens
BCCMCDCCCH
DGGGHGKGGV
ChIP-seq
Mathelier et al.(2014)
MA0599.1
0.808
0.942
KLF5
M08868_2.00
Homo sapiens
NHVNRCCMCDCCCH
DGGGHGKGGYNBDN
Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A
0.808
0.942
KLF5
M09502_2.00
Homo sapiens
GCCMCRCCCH
DGGGYGKGGC
Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402
0.808
0.942
KLF5
M10149_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3_01
0.808
0.942
KLF5
M10150_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3
0.808
0.942
KLF5
M04411_2.00
Homo sapiens
NMCACRCCYH
DRGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX
0.808
0.942
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.807
0.870
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.807
0.870
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.807
0.870
KLF3
M10172_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.807
0.870
KLF3
M10173_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.807
0.870
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.807
0.870
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.807
0.870
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.784
0.841
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN
NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.784
0.841
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.784
0.841
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.784
0.841
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.784
0.841
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.784
0.841
KLF4
M10217_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.784
0.841
KLF4
M10218_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.784
0.841
KLF4
M10219_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.784
0.841
KLF4
M10220_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.784
0.841
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.784
0.841
Klf12
M00787_2.00
Mus musculus
NNHMCRCCCH
DGGGYGKDNN
PBM
Weirauch et al.(2013)
pTH0977
0.781
0.841
Klf12
M02937_2.00
Mus musculus
GRCCACGCCCWHHHN
NDDDWGGGCGTGGYC
SELEX
Jolma et al.(2013)
Klf12_1
0.781
0.841
KLF12
M04430_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX
0.781
0.841
KLF12
M08299_2.00
Homo sapiens
SBNVGCCMCGCCCHB
VDGGGCGKGGCBNVS
ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME
0.781
0.841
KLF12
M08879_2.00
Homo sapiens
GCCCCGCCCYB
VRGGGCGGGGC
Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C
0.781
0.841
KLF12
M10186_2.00
Homo sapiens
HMYACDG
CHGTRKD
Transfac
Matys et al.(2006)
V$AP2REP_01
0.781
0.841
KLF12
M04431_2.00
Homo sapiens
RGSCGACGCCCN
NGGGCGTCGSCY
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1
0.781
0.841
KLF12
M04432_2.00
Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2
0.781
0.841
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH
DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.781
0.841
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.781
0.841
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.781
0.841
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.781
0.841
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.781
0.841
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH
DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.781
0.826
KLF2
M10210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.781
0.826
KLF2
M10211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.781
0.826
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.781
0.826
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM
KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.768
0.841
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.768
0.841
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.768
0.841
KLF1
M10163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.768
0.841
KLF1
M10164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.768
0.841
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH
DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.768
0.826
Klf1
M08099_2.00
Mus musculus
NRCCACACCCW
WGGGTGTGGYN
ChIP-seq
Mathelier et al.(2014)
MA0493.1
0.765
0.841
Klf1
M09008_2.00
Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK
Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A
0.765
0.841
Klf1
M09516_2.00
Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH
Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478
0.765
0.841
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.765
0.812
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.765
0.812
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.765
0.812
KLF6
M10113_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.765
0.812
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.765
0.812
dar1
M06171_2.00
Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY
B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454
0.762
0.826
dar1
M06172_2.00
Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN
B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454
0.762
0.826
Klf8
M00779_2.00
Mus musculus
NNNMCRCCYN
NRGGYGKNNN
PBM
Weirauch et al.(2013)
pTH3086
0.762
0.797
KLF8
M08867_2.00
Homo sapiens
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_HUMAN.H11MO.0.C
0.762
0.797
Klf8
M09000_2.00
Mus musculus
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_MOUSE.H11MO.0.C
0.762
0.797
KLF8
M10147_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5_01
0.762
0.797
KLF8
M10148_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5
0.762
0.797
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000000874
C2H2 ZF
341
365
HFCDYPGCQKVYTKSSHLKAHLRTH
ENSACAP00000000874
C2H2 ZF
371
395
YKCTWEGCDWRFARSDELTRHYRKH
ENSACAP00000000874
C2H2 ZF
401
423
FQCPVCSRSFSRSDHLALHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Anolis carolinensis
TFs
732 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30068.m002619
Ricinus communis
30068.m002619
I
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
Aquca_020_00034
Aquilegia coerulea
Aquca_020_00034
I
Aquca_020_00035
Aquilegia coerulea
Aquca_020_00035
I
NAC014
Arabidopsis thaliana
AT1G33060
I
NTL9
Arabidopsis thaliana
AT4G35580
D
Bo5g086780
Brassica oleracea
Bo5g086780
I
Bostr.3359s0059
Boechera stricta
Bostr.3359s0059
I
Bostr.7867s1416
Boechera stricta
Bostr.7867s1416
I
Bra010193
Brassica rapa
Bra010193
I
Cagra.1443s0001
Capsella grandiflora
Cagra.1443s0001
I
Cagra.2350s0100
Capsella grandiflora
Cagra.2350s0100
I
Carubv10007613m.g
Capsella rubella
Carubv10007613m.g
I
Carubv10008529m.g
Capsella rubella
Carubv10008529m.g
I
Ciclev10019282m.g
Citrus clementina
Ciclev10019282m.g
I
Ciclev10019368m.g
Citrus clementina
Ciclev10019368m.g
N
Cla002432
Citrullus lanatus
Cla002432
N
Cucsa.273280
Cucumis sativus
Cucsa.273280
N
Eucgr.E01095
Eucalyptus grandis
Eucgr.E01095
I
evm.TU.supercontig_37.112
Carica papaya
evm.TU.supercontig_37.112
I
ANAC014
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002639
I
NTL9
Arabidopsis lyrata
fgenesh2_kg.7__521__AT4G35580.1
I
gene01851-v1.0-hybrid
Fragaria vesca
gene01851-v1.0-hybrid
I
Gorai.003G073300
Gossypium raimondii
Gorai.003G073300
I
Gorai.008G261400
Gossypium raimondii
Gorai.008G261400
I
Lus10008285.g
Linum usitatissimum
Lus10008285.g
I
Lus10010148.g
Linum usitatissimum
Lus10010148.g
I
Lus10033251.g
Linum usitatissimum
Lus10033251.g
I
MDP0000146969
Malus domestica
MDP0000146969
I
MDP0000169485
Malus domestica
MDP0000169485
I
MDP0000658409
Malus domestica
MDP0000658409
I
mgf022344m
Mimulus guttatus
mgf022344m
I
orange1.1g007393m.g
Citrus sinensis
orange1.1g007393m.g
N
orange1.1g009388m.g
Citrus sinensis
orange1.1g009388m.g
I
PK02019.1
Cannabis sativa
PK02019.1
I
Pm029581
Prunus mume
Pm029581
I
POPTR_0001s45700
Populus trichocarpa
POPTR_0001s45700
I
POPTR_0011s15230
Populus trichocarpa
POPTR_0011s15230
I
PRUPE_ppa001291mg
Prunus persica
PRUPE_ppa001291mg
I
SapurV1A.0285s0090
Salix purpurea
SapurV1A.0285s0090
I
SapurV1A.0666s0060
Salix purpurea
SapurV1A.0666s0060
N
TCM_015584
Theobroma cacao
TCM_015584
I
Thhalv10007021m.g
Eutrema salsugineum
Thhalv10007021m.g
I
VIT_02s0025g03020
Vitis vinifera
VIT_02s0025g03020
I
VIT_16s0098g00760
Vitis vinifera
VIT_16s0098g00760
I
VIT_18s0001g01820
Vitis vinifera
VIT_18s0001g01820
I