SNAI3 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000012922 T089469_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI3
M04607_2.00 		Homo sapiens
YRCACCTGYH
DRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX 		0.792 0.956
SNAI3
M04608_2.00 		Homo sapiens
YVCACCTGYH
DRCAGGTGBR		 SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX 		0.792 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000023672 C2H2 ZF 152 174
ENSCJAP00000023672 C2H2 ZF 183 205
ENSCJAP00000023672 C2H2 ZF 209 231
ENSCJAP00000023672 C2H2 ZF 237 259
ENSCJAP00000023672 C2H2 ZF 265 286

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018165 Ailuropoda melanoleuca ENSAMEG00000018165 I 0.762
ENSCPOG00000012706 Cavia porcellus ENSCPOG00000012706 I 0.782
ENSCSAG00000003047 Chlorocebus sabaeus ENSCSAG00000003047 I 0.790
Snai3 Dipodomys ordii ENSDORG00000011547 I 0.800
SNAI3 Equus caballus ENSECAG00000012131 I 0.785
SNAI3 Homo sapiens ENSG00000185669 D 0.792
SNAI3 Gorilla gorilla ENSGGOG00000012559 I 0.792
SNAI3 Loxodonta africana ENSLAFG00000005117 I 0.768
SNAI3 Macaca mulatta ENSMMUG00000008716 I 0.790
ENSMPUG00000008104 Mustela putorius furo ENSMPUG00000008104 N 0.767
Snai3 Mus musculus ENSMUSG00000006587 I 0.771
ENSNLEG00000000595 Nomascus leucogenys ENSNLEG00000000595 I 0.800
SNAI3 Oryctolagus cuniculus ENSOCUG00000014852 I 0.780
SNAI3 Otolemur garnettii ENSOGAG00000000419 I 0.769
ENSP00000327968 Macaca fascicularis ENSP00000327968 I 0.790
ENSPANG00000000509 Papio anubis ENSPANG00000000509 I 0.790
ENSPPYG00000007643 Pongo abelii ENSPPYG00000007643 I 0.792
SNAI3 Pan troglodytes ENSPTRG00000008460 I 0.792
SNAI3 Pteropus vampyrus ENSPVAG00000017357 I 0.783
Snai3 Rattus norvegicus ENSRNOG00000013586 I 0.760
ENSSTOG00000021205 Ictidomys tridecemlineatus ENSSTOG00000021205 I 0.775