ENSCPOG00000012706 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000012706 T089957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI3
M04607_2.00 		Homo sapiens
YRCACCTGYH
DRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX 		0.773 0.850
SNAI3
M04608_2.00 		Homo sapiens
YVCACCTGYH
DRCAGGTGBR		 SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX 		0.773 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000011431 C2H2 ZF 141 165
ENSCPOP00000011431 C2H2 ZF 172 194
ENSCPOP00000011431 C2H2 ZF 197 213
ENSCPOP00000011431 C2H2 ZF 219 241
ENSCPOP00000011431 C2H2 ZF 247 267

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Snai3 Dipodomys ordii ENSDORG00000011547 I 0.790
SNAI3 Callithrix jacchus ENSCJAG00000012922 I 0.782
SNAI3 Otolemur garnettii ENSOGAG00000000419 I 0.781
SNAI3 Homo sapiens ENSG00000185669 D 0.773
SNAI3 Gorilla gorilla ENSGGOG00000012559 I 0.773
ENSNLEG00000000595 Nomascus leucogenys ENSNLEG00000000595 I 0.773
SNAI3 Pan troglodytes ENSPTRG00000008460 I 0.773
ENSSTOG00000021205 Ictidomys tridecemlineatus ENSSTOG00000021205 I 0.773
SNAI3 Oryctolagus cuniculus ENSOCUG00000014852 I 0.766
SNAI3 Equus caballus ENSECAG00000012131 I 0.765
ENSPPYG00000007643 Pongo abelii ENSPPYG00000007643 I 0.765
SNAI3 Pteropus vampyrus ENSPVAG00000017357 I 0.765
Snai3 Mus musculus ENSMUSG00000006587 I 0.764
ENSCSAG00000003047 Chlorocebus sabaeus ENSCSAG00000003047 I 0.763
SNAI3 Macaca mulatta ENSMMUG00000008716 I 0.763
ENSPANG00000000509 Papio anubis ENSPANG00000000509 I 0.763
ENSP00000327968 Macaca fascicularis ENSP00000327968 I 0.763
SNAI3 Loxodonta africana ENSLAFG00000005117 I 0.760
ENSMPUG00000008104 Mustela putorius furo ENSMPUG00000008104 N 0.756