KLF6 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000032379 T089722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF6
M04400_2.00 		Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN		 SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX 		0.827 1.000
KLF6
M08857_2.00 		Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A 		0.827 1.000
Klf6
M08962_2.00 		Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B 		0.827 1.000
KLF6
M10113_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CPBP_Q6 		0.827 1.000
KLF6
M04401_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX 		0.827 1.000
Klf7
M00134_2.00 		Mus musculus
NHHMCRCCCH
DGGGYGKDDN		 PBM
Badis et al.(2009)
Klf7_0974 		0.804 0.942
KLF7
M08298_2.00 		Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB		 ChIP-seq
Schmitges et al.(2016)
O75840.MEME 		0.804 0.942
Klf12
M00787_2.00 		Mus musculus
NNHMCRCCCH
DGGGYGKDNN		 PBM
Weirauch et al.(2013)
pTH0977 		0.790 0.812
Klf12
M02937_2.00 		Mus musculus
GRCCACGCCCWHHHN
NDDDWGGGCGTGGYC		 SELEX
Jolma et al.(2013)
Klf12_1 		0.790 0.812
KLF12
M04430_2.00 		Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH		 SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX 		0.790 0.812
KLF12
M08299_2.00 		Homo sapiens
SBNVGCCMCGCCCHB
VDGGGCGKGGCBNVS		 ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME 		0.790 0.812
KLF12
M08879_2.00 		Homo sapiens
GCCCCGCCCYB
VRGGGCGGGGC		 Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C 		0.790 0.812
KLF12
M10186_2.00 		Homo sapiens
HMYACDG
CHGTRKD		 Transfac
Matys et al.(2006)
V$AP2REP_01 		0.790 0.812
KLF12
M04431_2.00 		Homo sapiens
RGSCGACGCCCN
NGGGCGTCGSCY		 SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1 		0.790 0.812
KLF12
M04432_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2 		0.790 0.812
luna
M03704_2.00 		Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY		 SELEX
Nitta et al.(2015)
luna_1 		0.784 0.899
luna
M06163_2.00 		Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY		 B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765 		0.784 0.899
luna
M06164_2.00 		Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH		 B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765 		0.784 0.899
KLF3
M04418_2.00 		Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY		 SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX 		0.781 0.826
KLF3
M08876_2.00 		Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN		 Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B 		0.781 0.826
Klf3
M08982_2.00 		Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN		 Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A 		0.781 0.826
KLF3
M10172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF3_Q3_01 		0.781 0.826
KLF3
M10173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF3_Q3 		0.781 0.826
KLF3
M04419_2.00 		Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH		 SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1 		0.781 0.826
KLF3
M04420_2.00 		Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY		 SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2 		0.781 0.826
dar1
M06171_2.00 		Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY		 B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454 		0.771 0.812
dar1
M06172_2.00 		Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN		 B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454 		0.771 0.812
Klf1
M08099_2.00 		Mus musculus
NRCCACACCCW
WGGGTGTGGYN		 ChIP-seq
Mathelier et al.(2014)
MA0493.1 		0.768 0.812
Klf1
M09008_2.00 		Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK		 Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A 		0.768 0.812
Klf1
M09516_2.00 		Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH		 Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478 		0.768 0.812
KLF5
M04410_2.00 		Homo sapiens
NMCACRCCCH
DGGGYGTGKN		 SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX 		0.765 0.812
KLF5
M08086_2.00 		Homo sapiens
BCCMCDCCCH
DGGGHGKGGV		 ChIP-seq
Mathelier et al.(2014)
MA0599.1 		0.765 0.812
KLF5
M08868_2.00 		Homo sapiens
NHVNRCCMCDCCCH
DGGGHGKGGYNBDN		 Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A 		0.765 0.812
Klf5
M08965_2.00 		Mus musculus
KCCMCDCCCHBBBCH
DGVVVDGGGHGKGGM		 Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A 		0.765 0.812
KLF5
M09502_2.00 		Homo sapiens
GCCMCRCCCH
DGGGYGKGGC		 Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402 		0.765 0.812
KLF5
M10149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB2_Q3_01 		0.765 0.812
KLF5
M10150_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB2_Q3 		0.765 0.812
KLF5
M04411_2.00 		Homo sapiens
NMCACRCCYH
DRGGYGTGKN		 SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX 		0.765 0.812
KLF1
M00226_2.00 		Homo sapiens
CMCGCCCM
KGGGCGKG		 PBM
Barrera et al.(2016)
KLF1_REF 		0.765 0.797
KLF2
M04455_2.00 		Homo sapiens
NVCCMCRCCCH
DGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX 		0.765 0.797
KLF4
M04463_2.00 		Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN		 SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX 		0.765 0.797
KLF4
M08091_2.00 		Homo sapiens
MCACACCCWNN
NNWGGGTGTGK		 ChIP-seq
Mathelier et al.(2014)
MA0039.3 		0.765 0.797
Klf4
M08021_2.00 		Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB		 ChIP-seq
Chen et al.(2011)
SRP000217_Klf4 		0.765 0.797
KLF4
M08243_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF14 		0.765 0.797
KLF1
M08293_2.00 		Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN		 ChIP-seq
Schmitges et al.(2016)
Q13351.MEME 		0.765 0.797
KLF1
M08871_2.00 		Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS		 Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A 		0.765 0.797
KLF4
M08894_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A 		0.765 0.797
Klf4
M08964_2.00 		Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC		 Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A 		0.765 0.797
KLF1
M10163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5_01 		0.765 0.797
KLF1
M10164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5 		0.765 0.797
KLF4
M10217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_02 		0.765 0.797
KLF4
M10218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q3_01 		0.765 0.797
KLF4
M10219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q3 		0.765 0.797
KLF4
M10220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q4 		0.765 0.797
KLF2
M10210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LKLF_Q3 		0.765 0.797
KLF2
M10211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LKLF_Q6 		0.765 0.797
KLF2
M04456_2.00 		Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX 		0.765 0.797
KLF4
M04464_2.00 		Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX 		0.765 0.797
KLF1
M00224_2.00 		Homo sapiens
YMCGCCCH
DGGGCGKR		 PBM
Barrera et al.(2016)
KLF1_H299Y 		0.765 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000037991 C2H2 ZF 200 224
ENSCJAP00000037991 C2H2 ZF 230 254
ENSCJAP00000037991 C2H2 ZF 260 282
ENSCJAP00000046400 C2H2 ZF 93 117

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

813 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29728.m000800 Ricinus communis 29728.m000800 I
30174.m008944 Ricinus communis 30174.m008944 I
AMTR_s00017p00035550 Amborella trichopoda AMTR_s00017p00035550 I
BGIOSGA015954 Oryza indica BGIOSGA015954 I
PCF2 Oryza indica BGIOSGA026548 I
Bo6g110290 Brassica oleracea Bo6g110290 I
Bo7g084120 Brassica oleracea Bo7g084120 I
Bo9g014260 Brassica oleracea Bo9g014260 I
Bostr.0556s0373 Boechera stricta Bostr.0556s0373 I
Bostr.25993s0206 Boechera stricta Bostr.25993s0206 I
Bra000395 Brassica rapa Bra000395 I
Bra003986 Brassica rapa Bra003986 I
Bra007875 Brassica rapa Bra007875 I
Bra026506 Brassica rapa Bra026506 I
Bra029366 Brassica rapa Bra029366 I
Bra032973 Brassica rapa Bra032973 N
Bra039096 Brassica rapa Bra039096 I
BRADI4G35520 Brachypodium distachyon BRADI4G35520 I
Cagra.4247s0002 Capsella grandiflora Cagra.4247s0002 I
Carubv10020411m.g Capsella rubella Carubv10020411m.g I
cassava16176.m1 Manihot esculenta cassava16176.m1 I
cassava20535.m1 Manihot esculenta cassava20535.m1 I
cassava35625.valid.m1 Manihot esculenta cassava35625.valid.m1 I
cassava36888.valid.m1 Manihot esculenta cassava36888.valid.m1 I
Ca_16417 Cicer arietinum Ca_16417 I
Ca_25231 Cicer arietinum Ca_25231 I
chr5.CM0953.80.nc Lotus japonicus chr5.CM0953.80.nc I
chr6.CM0885.180.nc Lotus japonicus chr6.CM0885.180.nc I
Ciclev10001849m.g Citrus clementina Ciclev10001849m.g I
Ciclev10020275m.g Citrus clementina Ciclev10020275m.g I
Cucsa.363020 Cucumis sativus Cucsa.363020 I
evm.TU.supercontig_1815.2 Carica papaya evm.TU.supercontig_1815.2 I
evm.TU.supercontig_4.210 Carica papaya evm.TU.supercontig_4.210 I
fgenesh2_kg.2__549__AT1G58100.1 Arabidopsis lyrata fgenesh2_kg.2__549__AT1G58100.1 I
GLYMA03G02090 Glycine max GLYMA03G02090 I
GLYMA07G08710 Glycine max GLYMA07G08710 I
GLYMA07G29015 Glycine max GLYMA07G29015 I
GLYMA12G28970 Glycine max GLYMA12G28970 I
Gorai.001G273300 Gossypium raimondii Gorai.001G273300 I
Gorai.007G094200 Gossypium raimondii Gorai.007G094200 I
Gorai.011G086900 Gossypium raimondii Gorai.011G086900 I
GRMZM2G107031 Zea mays GRMZM2G107031 I
GSMUA_Achr11G17370_001 Musa acuminata GSMUA_Achr11G17370_001 I
GSMUA_Achr2G10690_001 Musa acuminata GSMUA_Achr2G10690_001 I
GSMUA_Achr3G12320_001 Musa acuminata GSMUA_Achr3G12320_001 I
GSMUA_Achr4G27220_001 Musa acuminata GSMUA_Achr4G27220_001 I
GSMUA_Achr5G03320_001 Musa acuminata GSMUA_Achr5G03320_001 I
GSMUA_Achr6G07930_001 Musa acuminata GSMUA_Achr6G07930_001 I
GSMUA_AchrUn_randomG00900_001 Musa acuminata GSMUA_AchrUn_randomG00900_001 I
GSMUA_AchrUn_randomG08350_001 Musa acuminata GSMUA_AchrUn_randomG08350_001 I
LjSGA_035107.1 Lotus japonicus LjSGA_035107.1 I
LPERR08G19160 Leersia perrieri LPERR08G19160 I
Lus10008444.g Linum usitatissimum Lus10008444.g I
Lus10008621.g Linum usitatissimum Lus10008621.g I
Lus10032022.g Linum usitatissimum Lus10032022.g I
Lus10035193.g Linum usitatissimum Lus10035193.g I
mgf020872m Mimulus guttatus mgf020872m I
MLOC_24269 Hordeum vulgare MLOC_24269 I
MLOC_49381 Hordeum vulgare MLOC_49381 I
MLOC_60577 Hordeum vulgare MLOC_60577 I
MLOC_61513 Hordeum vulgare MLOC_61513 I
MTR_1g101810 Medicago truncatula MTR_1g101810 I
MTR_8g033070 Medicago truncatula MTR_8g033070 I
OB08G29160 Oryza brachyantha OB08G29160 I
OBART08G22390 Oryza barthii OBART08G22390 I
OBART10G07150 Oryza barthii OBART10G07150 N
OGLUM01G10550 Oryza glumaepatula OGLUM01G10550 I
OGLUM04G24370 Oryza glumaepatula OGLUM04G24370 N
OGLUM08G23730 Oryza glumaepatula OGLUM08G23730 I
OLONG_002160 Oryza longistaminata OLONG_002160 I
OMERI08G17330 Oryza meridionalis OMERI08G17330 I
ONIVA08G25460 Oryza nivara ONIVA08G25460 I
OPUNC08G20520 Oryza punctata OPUNC08G20520 I
orange1.1g014326m.g Citrus sinensis orange1.1g014326m.g I
ORUFI01G09990 Oryza rufipogon ORUFI01G09990 I
ORUFI08G24920 Oryza rufipogon ORUFI08G24920 I
ORUFI09G18080 Oryza rufipogon ORUFI09G18080 I
PCF2 Oryza sativa OS08G0544800 D
Pavir.Ca00220 Panicum virgatum Pavir.Ca00220 I
Pavir.J05134 Panicum virgatum Pavir.J05134 I
Pavir.J12088 Panicum virgatum Pavir.J12088 I
Pavir.J15424 Panicum virgatum Pavir.J15424 I
PGSC0003DMG400000597 Solanum tuberosum PGSC0003DMG400000597 I
PK14653.1 Cannabis sativa PK14653.1 D
Pm016133 Prunus mume Pm016133 I
Pm018100 Prunus mume Pm018100 I
Pm019399 Prunus mume Pm019399 I
POPTR_0014s07450 Populus trichocarpa POPTR_0014s07450 I
PRUPE_ppa015342mg Prunus persica PRUPE_ppa015342mg I
PRUPE_ppa022140mg Prunus persica PRUPE_ppa022140mg I
PRUPE_ppa024948mg Prunus persica PRUPE_ppa024948mg I
SapurV1A.0169s0020 Salix purpurea SapurV1A.0169s0020 I
Si010765m.g Setaria italica Si010765m.g I
Si039258m.g Setaria italica Si039258m.g N
Solyc01g103780.2 Solanum lycopersicum Solyc01g103780.2 I
TCM_005447 Theobroma cacao TCM_005447 I
TCM_036394 Theobroma cacao TCM_036394 I
Thhalv10004391m.g Eutrema salsugineum Thhalv10004391m.g I
Traes_4AL_E57587E16 Triticum aestivum Traes_4AL_E57587E16 I
VIT_15s0048g01150 Vitis vinifera VIT_15s0048g01150 D