CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BX548067.2
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000100523
T091635_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000139812
C2H2 ZF
66
88
FTCTQCGKSFGRKHNLKIHMRIH
ENSDARP00000139812
C2H2 ZF
94
116
FKCTQCGKSFNQSSNLYNHMMIH
ENSDARP00000139812
C2H2 ZF
122
144
FKCTQCGKSFNRSSDLHQHMRIH
ENSDARP00000139812
C2H2 ZF
150
172
YTCTQCGKSFYCSSHLHQHMRIH
ENSDARP00000139812
C2H2 ZF
178
200
FTCTQCGKSFSQSSHFKQHMRIH
ENSDARP00000139812
C2H2 ZF
206
217
FTCTQCGKSFSQ
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf03171-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf03171-processed-gene-0.1
N
maker-nMf.1.1.scaf19771-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf19771-snap-gene-0.4
N
Minc02855
Meloidogyne incognita
Minc02855
N
Minc02856
Meloidogyne incognita
Minc02856
N