CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Yy2
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000011068
T092848_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000010401
C2H2 ZF
259
283
TPCAHPGCVKMFKDTAAMKKHLHIH
ENSDORP00000010401
C2H2 ZF
288
310
HMCAECGKAFVESSKLKRHQLVH
ENSDORP00000010401
C2H2 ZF
316
340
YQCIFEGCGKRFSLDFNLRTHVRIH
ENSDORP00000010401
C2H2 ZF
346
370
FACPFHTCNKKFAQSTNLKSHILTH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_017_00744
Aquilegia coerulea
Aquca_017_00744
N
BGIOSGA007071
Oryza indica
BGIOSGA007071
N
BGIOSGA009257
Oryza indica
BGIOSGA009257
N
BGIOSGA016756
Oryza indica
BGIOSGA016756
N
BGIOSGA027481
Oryza indica
BGIOSGA027481
N
BRADI3G54817
Brachypodium distachyon
BRADI3G54817
N
BRADI5G15587
Brachypodium distachyon
BRADI5G15587
N
cassava41082.m1
Manihot esculenta
cassava41082.m1
N
Ca_07743
Cicer arietinum
Ca_07743
N
Ciclev10021312m.g
Citrus clementina
Ciclev10021312m.g
N
Eucgr.K03256
Eucalyptus grandis
Eucgr.K03256
N
F775_08585
Aegilops tauschii
F775_08585
N
F775_17109
Aegilops tauschii
F775_17109
N
F775_18200
Aegilops tauschii
F775_18200
N
gene08112-v1.0-hybrid
Fragaria vesca
gene08112-v1.0-hybrid
N
GLYMA10G04350
Glycine max
GLYMA10G04350
N
GLYMA13G18620
Glycine max
GLYMA13G18620
N
GLYMA19G34881
Glycine max
GLYMA19G34881
N
Gorai.001G178800
Gossypium raimondii
Gorai.001G178800
N
Gorai.001G254300
Gossypium raimondii
Gorai.001G254300
N
Gorai.007G147300
Gossypium raimondii
Gorai.007G147300
N
GRMZM2G043813
Zea mays
GRMZM2G043813
N
GRMZM2G062009
Zea mays
GRMZM2G062009
N
GRMZM2G081930
Zea mays
GRMZM2G081930
N
GRMZM2G140901
Zea mays
GRMZM2G140901
I
GRMZM2G156977
Zea mays
GRMZM2G156977
N
GRMZM5G857701
Zea mays
GRMZM5G857701
I
GSMUA_Achr11G00880_001
Musa acuminata
GSMUA_Achr11G00880_001
N
GSMUA_Achr1G20530_001
Musa acuminata
GSMUA_Achr1G20530_001
N
GSMUA_Achr5G00500_001
Musa acuminata
GSMUA_Achr5G00500_001
N
GSMUA_Achr5G18670_001
Musa acuminata
GSMUA_Achr5G18670_001
N
GSMUA_Achr6G31350_001
Musa acuminata
GSMUA_Achr6G31350_001
N
GSMUA_Achr8G18980_001
Musa acuminata
GSMUA_Achr8G18980_001
N
GSMUA_AchrUn_randomG02760_001
Musa acuminata
GSMUA_AchrUn_randomG02760_001
N
LPERR02G30240
Leersia perrieri
LPERR02G30240
I
LPERR08G05360
Leersia perrieri
LPERR08G05360
N
Lus10003548.g
Linum usitatissimum
Lus10003548.g
N
Lus10033905.g
Linum usitatissimum
Lus10033905.g
N
MDP0000697030
Malus domestica
MDP0000697030
N
mgf009162m
Mimulus guttatus
mgf009162m
N
mgf018312m
Mimulus guttatus
mgf018312m
N
MLOC_12466
Hordeum vulgare
MLOC_12466
N
MLOC_5165
Hordeum vulgare
MLOC_5165
N
MTR_1g069805
Medicago truncatula
MTR_1g069805
N
MTR_7g097090
Medicago truncatula
MTR_7g097090
N
OB02G43380
Oryza brachyantha
OB02G43380
N
OB04G25790
Oryza brachyantha
OB04G25790
N
OB08G15810
Oryza brachyantha
OB08G15810
N
OBART02G05020
Oryza barthii
OBART02G05020
N
OBART02G36830
Oryza barthii
OBART02G36830
N
OBART04G18700
Oryza barthii
OBART04G18700
N
OGLUM02G38020
Oryza glumaepatula
OGLUM02G38020
I
OGLUM04G18750
Oryza glumaepatula
OGLUM04G18750
N
OGLUM08G06200
Oryza glumaepatula
OGLUM08G06200
N
OLONG_011232
Oryza longistaminata
OLONG_011232
N
OLONG_016454
Oryza longistaminata
OLONG_016454
N
OMERI02G05870
Oryza meridionalis
OMERI02G05870
N
OMERI02G34720
Oryza meridionalis
OMERI02G34720
N
ONIVA02G05190
Oryza nivara
ONIVA02G05190
N
ONIVA02G39640
Oryza nivara
ONIVA02G39640
N
ONIVA04G01950
Oryza nivara
ONIVA04G01950
N
ONIVA08G05790
Oryza nivara
ONIVA08G05790
N
OPUNC02G04160
Oryza punctata
OPUNC02G04160
N
OPUNC02G33860
Oryza punctata
OPUNC02G33860
N
OPUNC04G16450
Oryza punctata
OPUNC04G16450
N
OPUNC08G05520
Oryza punctata
OPUNC08G05520
N
ORGLA02G0046100
Oryza glaberrima
ORGLA02G0046100
N
ORGLA02G0320500
Oryza glaberrima
ORGLA02G0320500
N
ORGLA04G0158100
Oryza glaberrima
ORGLA04G0158100
N
ORGLA08G0051100
Oryza glaberrima
ORGLA08G0051100
N
ORUFI02G05100
Oryza rufipogon
ORUFI02G05100
N
ORUFI04G20200
Oryza rufipogon
ORUFI04G20200
N
ORUFI08G06500
Oryza rufipogon
ORUFI08G06500
N
OS02G0810900
Oryza sativa
OS02G0810900
N
OS04G0515900
Oryza sativa
OS04G0515900
N
OS08G0200600
Oryza sativa
OS08G0200600
N
Pavir.Aa00144
Panicum virgatum
Pavir.Aa00144
I
Pavir.Aa01668
Panicum virgatum
Pavir.Aa01668
N
Pavir.Ab02337
Panicum virgatum
Pavir.Ab02337
N
Pavir.Ga01251
Panicum virgatum
Pavir.Ga01251
N
Pavir.Gb00655
Panicum virgatum
Pavir.Gb00655
N
Pavir.Ib03261
Panicum virgatum
Pavir.Ib03261
N
Pavir.J11268
Panicum virgatum
Pavir.J11268
N
Pavir.J34679
Panicum virgatum
Pavir.J34679
I
PDK_20s1301681g003
Phoenix dactylifera
PDK_20s1301681g003
N
PDK_20s1665101g001
Phoenix dactylifera
PDK_20s1665101g001
N
PGSC0003DMG400025505
Solanum tuberosum
PGSC0003DMG400025505
N
PK19051.1
Cannabis sativa
PK19051.1
N
Pm020580
Prunus mume
Pm020580
N
PRUPE_ppa009628mg
Prunus persica
PRUPE_ppa009628mg
N
SapurV1A.0006s0680
Salix purpurea
SapurV1A.0006s0680
N
Sb04g026440
Sorghum bicolor
Sb04g026440
N
Sb04g036640
Sorghum bicolor
Sb04g036640
I
Si010799m.g
Setaria italica
Si010799m.g
N
Si017967m.g
Setaria italica
Si017967m.g
I
Si018001m.g
Setaria italica
Si018001m.g
N
Si036835m.g
Setaria italica
Si036835m.g
N
Solyc06g008360.2
Solanum lycopersicum
Solyc06g008360.2
N
Solyc09g025310.2
Solanum lycopersicum
Solyc09g025310.2
N
TCM_003998
Theobroma cacao
TCM_003998
N
Traes_6AL_B272C86BE
Triticum aestivum
Traes_6AL_B272C86BE
N
Traes_6AL_B92597EA9
Triticum aestivum
Traes_6AL_B92597EA9
N
Traes_6BL_99F790D57
Triticum aestivum
Traes_6BL_99F790D57
N
Traes_6BL_D00F04562
Triticum aestivum
Traes_6BL_D00F04562
I
Traes_6DL_1ABE78799
Triticum aestivum
Traes_6DL_1ABE78799
N
Traes_6DL_8A1342D56
Triticum aestivum
Traes_6DL_8A1342D56
N
TRIUR3_23299
Triticum urartu
TRIUR3_23299
N
TRIUR3_32754
Triticum urartu
TRIUR3_32754
N