BCL6 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000113916 T094856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6
M00227_2.00		 Homo sapiens
NTAATTRWNN
NNWYAATTAN		 PBM
Barrera et al.(2016)
BCL6_H676Y		 (Direct) (Direct)
BCL6
M00228_2.00		 Homo sapiens
NNVNDVRANN
NNTYBHNBNN		 PBM
Barrera et al.(2016)
BCL6_REF		 (Direct) (Direct)
BCL6
M04424_2.00		 Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1		 (Direct) (Direct)
BCL6
M04425_2.00		 Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2		 (Direct) (Direct)
BCL6
M04426_2.00		 Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1		 (Direct) (Direct)
BCL6
M04427_2.00		 Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2		 (Direct) (Direct)
BCL6
M08877_2.00		 Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A		 (Direct) (Direct)
BCL6
M10180_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_01		 (Direct) (Direct)
BCL6
M10181_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_02		 (Direct) (Direct)
BCL6
M10182_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3_01		 (Direct) (Direct)
BCL6
M10183_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3		 (Direct) (Direct)
BCL6
M10184_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q6		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bcl6
M08097_2.00 		Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN		 ChIP-seq
Mathelier et al.(2014)
MA0463.1 		0.827 1.000
Bcl6
M08024_2.00 		Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD		 ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim 		0.827 1.000
Bcl6
M08972_2.00 		Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A 		0.827 1.000
Bcl6
M09513_2.00 		Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN		 Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00227_2.00 C2H2 ZF 15 38
M00227_2.00 C2H2 ZF 43 65
M00227_2.00 C2H2 ZF 71 93
M00227_2.00 C2H2 ZF 99 121
M00227_2.00 C2H2 ZF 127 149
M00227_2.00 C2H2 ZF 155 172
M00228_2.00 C2H2 ZF 15 38
M00228_2.00 C2H2 ZF 43 65
M00228_2.00 C2H2 ZF 71 93
M00228_2.00 C2H2 ZF 99 121
M00228_2.00 C2H2 ZF 127 149
M00228_2.00 C2H2 ZF 155 178

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000232014 C2H2 ZF 518 541
ENSP00000232014 C2H2 ZF 546 568
ENSP00000232014 C2H2 ZF 574 596
ENSP00000232014 C2H2 ZF 602 624
ENSP00000232014 C2H2 ZF 630 652
ENSP00000232014 C2H2 ZF 658 681
ENSP00000384371 C2H2 ZF 518 541
ENSP00000384371 C2H2 ZF 546 568
ENSP00000384371 C2H2 ZF 574 596
ENSP00000384371 C2H2 ZF 602 624
ENSP00000384371 C2H2 ZF 630 652
ENSP00000384371 C2H2 ZF 658 681
ENSP00000413122 C2H2 ZF 518 540
ENSP00000413122 C2H2 ZF 546 568
ENSP00000413122 C2H2 ZF 574 596
ENSP00000413122 C2H2 ZF 602 625
ENSP00000479784 C2H2 ZF 518 540
ENSP00000479784 C2H2 ZF 546 568
ENSP00000479784 C2H2 ZF 574 596
ENSP00000479784 C2H2 ZF 602 625

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006206 Aedes aegypti AAEL006206 I 0.000
AALB002484 Anopheles albimanus AALB002484 I 0.000
Aan_R001045 Calypte anna Aan_R001045 I 0.000
AARA010038 Anopheles arabiensis AARA010038 I 0.000
AATE012814 Anopheles atroparvus AATE012814 I 0.000
ACUA002550 Anopheles culicifacies ACUA002550 I 0.000
ACYPI54231 Acyrthosiphon pisum ACYPI54231 I 0.000
ADAC008115 Anopheles darlingi ADAC008115 I 0.000
ADIR002542 Anopheles dirus ADIR002542 I 0.000
AEPI002821 Anopheles epiroticus AEPI002821 I 0.000
AFAF016092 Anopheles farauti AFAF016092 I 0.000
Afo_R003467 Aptenodytes forsteri Afo_R003467 I 0.000
AFUN001530 Anopheles funestus AFUN001530 I 0.000
AGAP003756 Anopheles gambiae AGAP003756 I 0.000
Alligator_sinensis_CCG002586.1 Alligator sinensis Alligator_sinensis_CCG002586.1 I 0.000
AMEC003522 Anopheles melas AMEC003522 I 0.000
AMEM014204 Anopheles merus AMEM014204 I 0.000
AMIN002935 Anopheles minimus AMIN002935 I 0.000
AQUA001453 Anopheles quadriannulatus AQUA001453 I 0.000
ASIS006982 Anopheles sinensis ASIS006982 I 0.000
ASTEI00910 Anopheles stephensi ASTEI00910 I 0.000
BGIBMGA004895 Bombyx mori BGIBMGA004895 I 0.000
Brh_R002964 Buceros rhinoceros Brh_R002964 I 0.000
CapteG220993 Capitella teleta CapteG220993 I 0.000
Cflo_09551--XP_001121057.1_APIME Camponotus floridanus Cflo_09551--XP_001121057.1_APIME I 0.000
CLEC009418 Cimex lectularius CLEC009418 I 0.000
Cmyd_10011491 Chelonia mydas Cmyd_10011491 I 0.000
CPIJ010303 Culex quinquefasciatus CPIJ010303 I 0.000
CPIJ012703 Culex quinquefasciatus CPIJ012703 I 0.000
CpipJ_CPIJ010303 Culex pipiens CpipJ_CPIJ010303 I 0.000
CpipJ_CPIJ012703 Culex pipiens CpipJ_CPIJ012703 I 0.000
DAPPUDRAFT_99035 Daphnia pulex DAPPUDRAFT_99035 I 0.000
ENSACAG00000011821 Anolis carolinensis ENSACAG00000011821 I 0.000
ENSAMEG00000019030 Ailuropoda melanoleuca ENSAMEG00000019030 I 0.000
ENSAPLG00000001417 Anas platyrhynchos ENSAPLG00000001417 I 0.000
FERD3L Bos taurus ENSBTAG00000039955 I 0.000
FERD3L Canis familiaris ENSCAFG00000002506 I 0.000
ENSCSAG00000019609 Chlorocebus sabaeus ENSCSAG00000019609 I 0.000
ferd3l Danio rerio ENSDARG00000092160 I 0.000
FERD3L Dasypus novemcinctus ENSDNOG00000037813 I 0.000
Ferd3l Dipodomys ordii ENSDORG00000012867 I 0.000
FERD3L Equus caballus ENSECAG00000002518 I 0.000
FERD3L Erinaceus europaeus ENSEEUG00000004309 I 0.000
ENSFALG00000014487 Ficedula albicollis ENSFALG00000014487 I 0.000
FERD3L Felis catus ENSFCAG00000010289 I 0.000
FERD3L Homo sapiens ENSG00000146618 D 0.000
FERD3L Gasterosteus aculeatus ENSGACG00000006421 I 0.000
FERD3L Gallus gallus ENSGALG00000010862 I 0.000
FERD3L Gorilla gorilla ENSGGOG00000021943 I 0.000
ENSLACG00000013215 Latimeria chalumnae ENSLACG00000013215 I 0.000
FERD3L Loxodonta africana ENSLAFG00000012782 I 0.000
ENSLOCG00000018351 Lepisosteus oculatus ENSLOCG00000018351 I 0.000
ENSMEUG00000016077 Macropus eugenii ENSMEUG00000016077 I 0.000
FERD3L Meleagris gallopavo ENSMGAG00000015843 I 0.000
ENSMICG00000010110 Microcebus murinus ENSMICG00000010110 I 0.000
FERD3L Myotis lucifugus ENSMLUG00000006930 I 0.000
FERD3L Macaca mulatta ENSMMUG00000011174 I 0.000
FERD3L Monodelphis domestica ENSMODG00000001405 I 0.000
Ferd3l Mus musculus ENSMUSG00000046518 I 0.000
ENSNLEG00000019265 Nomascus leucogenys ENSNLEG00000019265 I 0.000
FERD3L Ornithorhynchus anatinus ENSOANG00000009615 I 0.000
ENSOARG00000008159 Ovis aries ENSOARG00000008159 I 0.000
FERD3L Oryctolagus cuniculus ENSOCUG00000016121 I 0.000
FERD3L Otolemur garnettii ENSOGAG00000014773 I 0.000
FERD3L Ochotona princeps ENSOPRG00000004265 I 0.000
FERD3L Oryzias latipes ENSORLG00000004008 I 0.000
ENSP00000275461 Macaca fascicularis ENSP00000275461 I 0.000
ENSP00000275461-D1 Bos grunniens ENSP00000275461-D1 I 0.000
ENSPANG00000010936 Papio anubis ENSPANG00000010936 I 0.000
FERD3L Procavia capensis ENSPCAG00000013680 I 0.000
ENSPFOG00000020055 Poecilia formosa ENSPFOG00000020055 I 0.000
ENSPPYG00000017753 Pongo abelii ENSPPYG00000017753 I 0.000
ENSPSIG00000000691 Pelodiscus sinensis ENSPSIG00000000691 I 0.000
FERD3L Pan troglodytes ENSPTRG00000018961 I 0.000
FERD3L Pteropus vampyrus ENSPVAG00000001711 I 0.000
Ferd3l Rattus norvegicus ENSRNOG00000011091 I 0.000
ENSSHAG00000013034 Sarcophilus harrisii ENSSHAG00000013034 I 0.000
FERD3L Sus scrofa ENSSSCG00000015371 I 0.000
ENSSTOG00000025739 Ictidomys tridecemlineatus ENSSTOG00000025739 I 0.000
FERD3L Tupaia belangeri ENSTBEG00000003400 I 0.000
FERD3L Taeniopygia guttata ENSTGUG00000002644 I 0.000
FERD3L Tetraodon nigroviridis ENSTNIG00000017777 I 0.000
FERD3L Takifugu rubripes ENSTRUG00000014737 I 0.000
ENSTSYG00000010121 Tarsius syrichta ENSTSYG00000010121 I 0.000
ENSXMAG00000020141 Xiphophorus maculatus ENSXMAG00000020141 I 0.000
Fer3 Drosophila melanogaster FBgn0037937 D 0.000
GA19952 Drosophila pseudoobscura FBgn0079948 I 0.000
GF16621 Drosophila ananassae FBgn0093642 I 0.000
GG17199 Drosophila erecta FBgn0109426 I 0.000
GH19315 Drosophila grimshawi FBgn0126780 I 0.000
GI23534 Drosophila mojavensis FBgn0146260 I 0.000
GI23536 Drosophila mojavensis FBgn0146262 I 0.000
GL12254 Drosophila persimilis FBgn0149861 I 0.000
GM26078 Drosophila sechellia FBgn0180933 I 0.000
GD20641 Drosophila simulans FBgn0192107 I 0.000
GJ10284 Drosophila virilis FBgn0197570 I 0.000
GK11993 Drosophila willistoni FBgn0214004 I 0.000
GE10092 Drosophila yakuba FBgn0227974 I 0.000
GB43632 Apis mellifera GB43632 I 0.000
Gfo_R002784 Geospiza fortis Gfo_R002784 I 0.000
Hsal_03622--XP_001120620.1_APIME Harpegnathos saltator Hsal_03622--XP_001120620.1_APIME I 0.000
KGM_11961 Danaus plexippus KGM_11961 I 0.000
L798_14654 Zootermopsis nevadensis L798_14654 I 0.000
LCUP001463 Lucilia cuprina LCUP001463 I 0.000
LDEC012244 Leptinotarsa decemlineata LDEC012244 I 0.000
LLOJ008652 Lutzomyia longipalpis LLOJ008652 I 0.000
LotgiG70434 Lottia gigantea LotgiG70434 I 0.000
MDOA004267 Musca domestica MDOA004267 I 0.000
MDOA011992 Musca domestica MDOA011992 I 0.000
Myotis_brandtii_FERD3L_10031741 Myotis brandtii Myotis_brandtii_FERD3L_10031741 I 0.000
NV15852 Nasonia vitripennis NV15852 I 0.000
Ocbimv22002150m.g Octopus bimaculoides Ocbimv22002150m.g I 0.000
Ogr11551 Ophisaurus gracilis Ogr11551 I 0.000
PHUM129440 Pediculus humanus PHUM129440 I 0.000
PPAI004805 Phlebotomus papatasi PPAI004805 I 0.000
SINV15648 Solenopsis invicta SINV15648 I 0.000
SMAR003412 Strigamia maritima SMAR003412 I 0.000
SMAR006706 Strigamia maritima SMAR006706 I 0.000
SMU15040320 Schmidtea mediterranea SMU15040320 I 0.000
TC001473 Tribolium castaneum TC001473 I 0.000
tetur07g05370 Tetranychus urticae tetur07g05370 I 0.000
ferd3l Xenopus tropicalis XB-GENE-983144 I 0.000
YQE_05939 Dendroctonus ponderosae YQE_05939 I 0.000