zbtb20 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000020693 T095806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB20
M04599_2.00 		Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX 		0.771 0.965
ZBTB20
M04600_2.00 		Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX 		0.771 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000027362 C2H2 ZF 479 501
ENSGACP00000027362 C2H2 ZF 507 529
ENSGACP00000027362 C2H2 ZF 535 557
ENSGACP00000027362 C2H2 ZF 563 585
ENSGACP00000027362 C2H2 ZF 614 636
ENSGACP00000027363 C2H2 ZF 384 406
ENSGACP00000027363 C2H2 ZF 412 434
ENSGACP00000027363 C2H2 ZF 440 462
ENSGACP00000027363 C2H2 ZF 468 490

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA023199 Oryza indica BGIOSGA023199 N
BRADI1G19740 Brachypodium distachyon BRADI1G19740 N
BRADI1G36870 Brachypodium distachyon BRADI1G36870 N
GRMZM2G148940 Zea mays GRMZM2G148940 N
MLOC_68272 Hordeum vulgare MLOC_68272 N
OB06G27780 Oryza brachyantha OB06G27780 N
ORGLA06G0166100 Oryza glaberrima ORGLA06G0166100 N
OS06G0597800 Oryza sativa OS06G0597800 N
Pavir.J21189 Panicum virgatum Pavir.J21189 N
Pavir.J26020 Panicum virgatum Pavir.J26020 N
Sb10g023270 Sorghum bicolor Sb10g023270 N
Si007937m.g Setaria italica Si007937m.g N
Traes_7BL_8C67B476B Triticum aestivum Traes_7BL_8C67B476B N
Traes_7DL_2C70F034C Triticum aestivum Traes_7DL_2C70F034C N
TRIUR3_10746 Triticum urartu TRIUR3_10746 N