CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_68272
(
Hordeum vulgare
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
MLOC_68272
T179716_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_68272.2
FAR1
82
176
AFYNEYALGLGFGIRVARSRSERRKGTEVLVMKRFVCMKEGHHKKKKDVDSSNKKKRKRLSIREGCPAMMEVVRRAPEKWVITKLVLEHTHVIVS
MLOC_68272.3
FAR1
82
176
AFYNEYALGLGFGIRVARSRSERRKGTEVLVMKRFVCMKEGHHKKKKDVDSSNKKKRKRLSIREGCPAMMEVVRRAPEKWVITKLVLEHTHVIVS
MLOC_68272.4
FAR1
82
176
AFYNEYALGLGFGIRVARSRSERRKGTEVLVMKRFVCMKEGHHKKKKDVDSSNKKKRKRLSIREGCPAMMEVVRRAPEKWVITKLVLEHTHVIVS
MLOC_68272.5
FAR1
82
176
AFYNEYALGLGFGIRVARSRSERRKGTEVLVMKRFVCMKEGHHKKKKDVDSSNKKKRKRLSIREGCPAMMEVVRRAPEKWVITKLVLEHTHVIVS
Links
Other
FAR1
family TFs
Other
Hordeum vulgare
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIUR3_10746
Triticum urartu
TRIUR3_10746
N
0.978
Traes_7BL_8C67B476B
Triticum aestivum
Traes_7BL_8C67B476B
N
0.922
Traes_7DL_2C70F034C
Triticum aestivum
Traes_7DL_2C70F034C
N
0.922
BRADI1G19740
Brachypodium distachyon
BRADI1G19740
N
0.889
GRMZM2G148940
Zea mays
GRMZM2G148940
N
0.878
Sb10g023270
Sorghum bicolor
Sb10g023270
N
0.878
BGIOSGA023199
Oryza indica
BGIOSGA023199
N
0.867
BRADI1G36870
Brachypodium distachyon
BRADI1G36870
N
0.867
ORGLA06G0166100
Oryza glaberrima
ORGLA06G0166100
N
0.867
OS06G0597800
Oryza sativa
OS06G0597800
N
0.867
OB06G27780
Oryza brachyantha
OB06G27780
N
0.844
Pavir.J21189
Panicum virgatum
Pavir.J21189
N
0.844
Pavir.J26020
Panicum virgatum
Pavir.J26020
N
0.833
PDK_20s1456351g001
Phoenix dactylifera
PDK_20s1456351g001
N
0.833
Si007937m.g
Setaria italica
Si007937m.g
N
0.793