CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BCL11A
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000007337
T096248_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.827
1.000
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.827
1.000
BCL11A
M10187_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.827
1.000
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.806
0.947
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.806
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000007181
C2H2 ZF
378
399
SCEFCGKTFKFQSNLVVHRRSH
ENSGGOP00000007181
C2H2 ZF
405
427
YKCNLCDHACTQASKLKRHMKTH
ENSGGOP00000007181
C2H2 ZF
742
764
DTCEYCGKVFKNCSNLTVHRRSH
ENSGGOP00000007181
C2H2 ZF
770
792
YKCELCNYACAQSSKLTRHMKTH
ENSGGOP00000007181
C2H2 ZF
800
823
YKCEICKMPFSVYSTLEKHMKKWH
ENSGGOP00000023481
C2H2 ZF
170
193
YTCTTCKQPFTSAWFLLQHAQNTH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001004901
Diphyllobothrium latum
DILT_0001004901
N
EmuJ_000419500
Echinococcus multilocularis
EmuJ_000419500
N
HmN_000865600
Hymenolepis microstoma
HmN_000865600
N
MCOS_0000070201
Mesocestoides corti
MCOS_0000070201
N
Sjc_0040590
Schistosoma japonicum
Sjc_0040590
N
Smp_073680
Schistosoma mansoni
Smp_073680
N
SMTD_0001467001
Schistosoma mattheei
SMTD_0001467001
N
SROB_0001853501
Schistosoma rodhaini
SROB_0001853501
N
SSLN_0000810201
Schistocephalus solidus
SSLN_0000810201
N
T265_05686
Opisthorchis viverrini
T265_05686
N
TASK_0000929501
Taenia asiatica
TASK_0000929501
N
TRE_0001104801
Trichobilharzia regenti
TRE_0001104801
N
TsM_000321300
Taenia solium
TsM_000321300
N
TTAC_0000046901
Hydatigera taeniaeformis
TTAC_0000046901
N