CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001853501
(
Schistosoma rodhaini
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
SROB_0001853501
T343613_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001853501-mRNA-1
TBP
34
116
KPVIHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVVMRLREPRVTCLVFGTGRMVCTGARSESDANLGSRKCARILQRL
SROB_0001853501-mRNA-1
TBP
124
207
NFTIQNMVGLADLKFPIRLEGVQLANEQMTQYEPEIFPALIYRIIKPRLVMLIFVNGKIVMTGAKSREHLYEALNNVYPILYNY
Links
Other
TBP
family TFs
Other
Schistosoma rodhaini
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_073680
Schistosoma mansoni
Smp_073680
N
1.000
A_02598
Schistosoma haematobium
A_02598
N
0.994
SCUD_0000710001
Schistosoma curassoni
SCUD_0000710001
N
0.994
SMRZ_0000513201
Schistosoma margrebowiei
SMRZ_0000513201
N
0.994
SMTD_0001467001
Schistosoma mattheei
SMTD_0001467001
N
0.979
Sjc_0040590
Schistosoma japonicum
Sjc_0040590
N
0.958
TRE_0001104801
Trichobilharzia regenti
TRE_0001104801
N
0.922
T265_05686
Opisthorchis viverrini
T265_05686
N
0.820
SSLN_0000810201
Schistocephalus solidus
SSLN_0000810201
N
0.725
DILT_0001004901
Diphyllobothrium latum
DILT_0001004901
N
0.713
EmuJ_000419500
Echinococcus multilocularis
EmuJ_000419500
N
0.707
TsM_000321300
Taenia solium
TsM_000321300
N
0.707
HDID_0000507901
Hymenolepis diminuta
HDID_0000507901
N
0.701