CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GTF3A *(Myotis lucifugus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSMLUG00000002158	T098748_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Gtf3a M10338_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TFIIIA_01	0.785	0.884
Gtf3a M10364_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TFIIIA_02	0.765	0.870
GTF3A M08301_2.00	Homo sapiens	CTCCCATCC	GGATGGGAG	ChIP-seq Schmitges et al.(2016) Q92664_3-5.RCADE	0.761	0.908
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSMLUP00000001966	C2H2 ZF	35	59	FICSFPDCSASYNKAWKLDAHLCKH
ENSMLUP00000001966	C2H2 ZF	65	89	FVCDHEGCGKAFVRDYHLSRHALLH
ENSMLUP00000001966	C2H2 ZF	95	120	FVCAASGCDQKFNTKSNLKKHFEHKH
ENSMLUP00000001966	C2H2 ZF	127	151	YVCTFEGCKKTFRKHQQLKTHQCQH
ENSMLUP00000001966	C2H2 ZF	157	181	FKCTHEGCGKHFASPSRLKRHGKVH
ENSMLUP00000001966	C2H2 ZF	184	208	YKCQKECSFVAKTWTELLKHVRETH
ENSMLUP00000001966	C2H2 ZF	212	234	IICEVCQKTFKRKDYLKQHMKTH
ENSMLUP00000001966	C2H2 ZF	241	266	CRCPREGCGRTYTTVFNLQSHILSFH
ENSMLUP00000001966	C2H2 ZF	272	296	FVCEHTGCGKTFAMKQSLTRHAVVH

Links
Other C2H2 ZF family TFs
Other *Myotis lucifugus* TFs