CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Myotis_brandtii_GTF3A_10026415 *(Myotis brandtii)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Myotis_brandtii_GTF3A_10026415	T136034_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Gtf3a M10338_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TFIIIA_01	0.785	0.884
Gtf3a M10364_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TFIIIA_02	0.765	0.870
GTF3A M08301_2.00	Homo sapiens	CTCCCATCC	GGATGGGAG	ChIP-seq Schmitges et al.(2016) Q92664_3-5.RCADE	0.761	0.908
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	149	173	FICSFPDCSASYNKAWKLDAHLCKH
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	179	203	FVCDYEGCGKAFVRDYHLSRHALLH
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	209	234	FVCAASGCDQKFNTKSNLKKHFEHKH
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	241	265	YVCTFEGCKKTFRKHQQLKTHQCQH
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	271	295	FKCTHEGCGKHFASPSRLKRHGKVH
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	298	322	YKCQKECSFVAKTWTELLKHVRETH
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	326	348	IICEVCQKTFKRKDYLKQHMKTH
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	355	380	CRCPREGCGRTYTTVFNLQSHILSFH
Myotis_brandtii_GTF3A_10026415	C2H2 ZF	386	410	FVCEHAGCGKTFAMKQSLTRHAVVH

Links
Other C2H2 ZF family TFs
Other *Myotis brandtii* TFs