PRDM6 (Myotis lucifugus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMLUG00000010064 T098866_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000009157 C2H2 ZF 275 296
ENSMLUP00000009157 C2H2 ZF 303 325
ENSMLUP00000009157 C2H2 ZF 331 353
ENSMLUP00000009157 C2H2 ZF 359 380

Links

Other C2H2 ZF family TFs
Other Myotis lucifugus TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_052510.2 Lotus japonicus LjSGA_052510.2 N 0.000
LjSGA_074894.2 Lotus japonicus LjSGA_074894.2 N 0.000