LjSGA_074894.2 (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjSGA_074894.2 T259393_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_074894.2 MADS box 24 71

Links

Other MADS box family TFs
Other Lotus japonicus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr1.LjB17A22.10.nc Lotus japonicus chr1.LjB17A22.10.nc N 0.979
chr1.LjB17A22.80.nc Lotus japonicus chr1.LjB17A22.80.nc N 0.979
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.938
LjSGA_056509.1 Lotus japonicus LjSGA_056509.1 N 0.875
LjSGA_064645.1 Lotus japonicus LjSGA_064645.1 N 0.875
LjSGA_102731.1 Lotus japonicus LjSGA_102731.1 N 0.854
LjSGA_070157.1 Lotus japonicus LjSGA_070157.1 N 0.851
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.750
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.750
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.729
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.729
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.729
Cla006571 Citrullus lanatus Cla006571 N 0.729
Pm021070 Prunus mume Pm021070 N 0.729
Pm021071 Prunus mume Pm021071 N 0.729
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.729
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.729
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.729
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.729
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.729
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.729
AGL28 Arabidopsis thaliana AT1G01530 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
Bra026764 Brassica rapa Bra026764 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.708
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.708
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.708
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.708
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.708
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.708
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.708
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.708
Pm016629 Prunus mume Pm016629 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.708
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.708
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.708
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.708
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
MDP0000168914 Malus domestica MDP0000168914 N 0.708
MDP0000233925 Malus domestica MDP0000233925 N 0.708
MDP0000278770 Malus domestica MDP0000278770 N 0.708
MDP0000434703 Malus domestica MDP0000434703 I 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.708
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.708
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.708
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.708
LjSGA_052510.2 Lotus japonicus LjSGA_052510.2 N 0.708
LjSGA_100314.1 Lotus japonicus LjSGA_100314.1 N 0.708